Gene Slin_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1372 
Symbol 
ID8725105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1667775 
End bp1668533 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content48% 
IMG OID 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003386221 
Protein GI284036291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0780489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATC GTCTTGTCCT AGCCCTCCTG TTAGTACCGG TGTCGACCAC ACTGGCTCAG 
AAAATTCATT CTCACAACGA TTATGCCAAA GCTCGTCCAT TTGTGGAGGC TTATGAGCAA
CGGGCCGACT TTATCGAAGC CGATGTCTGG TTGCGGAACG GGGATTTGGT TGTTTCTCAT
GAAAAGCCTG AAGAGAGTTC TCAGAAACCA CCAACGCTGG ATTCTTTGTA CTTACGCCCT
ATTGCCCAAT TATTTCAGCA GTATAAAGAC AAACCCAGCT CCGACCGGGA TTATACCTTT
TCGCTGGTGA TCGACATCAA GGAAAATCCG GCGGGGGTAT TGCCAAAGCT CATGGAAAAA
TTACAGCAAA ACCTGGTTTG CTTTAACCGG TCGGCCAATG CCAAAGCGAT CCAAGTCATC
ATCAGTGGTG AACGCCCTAA AATAGATACT TACCTGGACT ATCCCCTGAT CCAGTTCGAT
GGTCGGCCGA GCGAAGTATA TGATCAGGAA ACGCTACAGC GGGTAGCGAT GATAAGCGAT
AGTTTTCAGT CGTACTCCCG CTGGAATGGT GTTGGCGACA TTACCGATAC AGACCGAGAC
AAGCTCAAGC GGGTCATAAA ACGAGCCCAT AGTGATAACA AACCTTTTCG TTTCTGGGCC
ATTCCCGATA CGCCAAACGG CTGGAAGCAG TTAAAAAAAC TGGGTGTCGA TATTATCAAT
ACAGACAACG TTGCAGAGGC CGTAAAGGCA AGGCGGTGA
 
Protein sequence
MNYRLVLALL LVPVSTTLAQ KIHSHNDYAK ARPFVEAYEQ RADFIEADVW LRNGDLVVSH 
EKPEESSQKP PTLDSLYLRP IAQLFQQYKD KPSSDRDYTF SLVIDIKENP AGVLPKLMEK
LQQNLVCFNR SANAKAIQVI ISGERPKIDT YLDYPLIQFD GRPSEVYDQE TLQRVAMISD
SFQSYSRWNG VGDITDTDRD KLKRVIKRAH SDNKPFRFWA IPDTPNGWKQ LKKLGVDIIN
TDNVAEAVKA RR