Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1371 |
Symbol | |
ID | 8725104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1665931 |
End bp | 1667685 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_003386220 |
Protein GI | 284036290 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.122275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC CTCAACTCAA AAAAGCCCCC CTTGTCTACG ACGTAGCTAT AGTCGGCTCA GGTGCAGGGG GCGGCATGGC TGCCTACATG CTCGCCAAAG CAGGCGCAAA AGTTGTTCTG CTCGAAGCAG GTGGTTACTA TGACCCGGCC GATCCTAAGT ACATCACACA ACTGAAATGG CCCTGGGAAT CACCCCGGCG TGGTGCCAGT ACCGAAGCTC GCTCCGGCGG TGATTTCGAT GCAGCCTGGG GCGGCTGGGA AATAGACGGC GAGCCTTATT CGGCAAAGTC AGGTACAGAA TTCGGCTGGT TCCGGTCGAG AATGCTCGGC GGACGTACCA ACCACTGGGG CCGTATCTCC ATGCGCTTTG GCCCCGACGA TTTTCGGCGT CGGTCGCTGT CGGGTGTGGG CGACGACTGG CCAATCACCT ACGACGACCT CAAGCCCTAT TACGATAAAG TAGACCGGCT CATTGGCGTC TTTGGCTCGG TTGAAAACTT TCCGAATGAA CCCGATGGCA TTTTCCTCCC CCCTCCCAAG CCACGCCTGC ACGAGTTAAT GATTCGAAAG GGCGCACGGA GCATTGGCAT TCCCGTTATT CCATCCCGCT TAAGTATTCT GACCAAGCCC ATTAATAAAG ACCGGGGCTC CTGCTTCTAC TGCCACCAGT GCAACCGGGG TTGTCAGGCT TATGCCGACT TCTCGGCATC GTCGGTCCTG TGTATTCCGG CGGTTAAAAC GGGCAATGTA ACGCTCATCA ATGGAGCCAT GGTACGCGAA GTACTCACCG ATCCGCAGAC GGGTCTGGCA ACAGGAATCA GCTACGTGAA TAAACATACT TTGGAGGAAA TAACGGTTCG GGCAAAAGCT GTTATGCTGG GCGCAAGTAC CTGCGAATCG GCACGGATTC TCCTGAATTC AAAATCCTCA CGTTTTCCGA ACGGACTGGC CAACAGCAGC GGTGTGGTCG GAAAATACCT CAACGACTCA ACGGGTGCCA GCCGTTCGGC ATTCATCCCG GCGCTTATGG ACCGCAAACG CTACAACGAA GATGGCGTAG GCGGTATGCA CGTGTTTACG CCCTGGTGGC TCGATAATAA GAAGCTTGAT TTCCCCAGAG GCTATCACAT CGAGTACGGT GGCGGCATGG GTATGCCCGG CTATGGCTTT GGCAGTGGCA TAGAATCGCT TAACGGCATG ATTCCAGGTC GTGATGGTAA AACAAAAACG GCAGGTGGAT ACGGAGCTAG CCTGAAGGAT GATTACCGAC GATTTTACGG AGCGTATATT GGCATGTCGG GTCGGGGCGA GCCTGTCCCT CTCGAAAGCA ACTACTGCGA AATTGACCCG AATTCTGTCG ATAAATACGG GATTCCTACA CTACGCTTCC ATTACAAATG GTCGGATTAC GAAGTGAAGC AGGCTAAACA CATGCAGGAC ACCTTCGAGG AAATCATTCA TGCGATGGGC GGTATTGCGC TGGGTCCTAA ACCCGGTCCT AATACAGCGC ATGGCTATGG TCTTGCCGCG CCTGGTCGTA TTATTCACGA AGTGGGTACC GTTCGTATGG GAAATGACCC GCAAAAATCA GCGCTGAACA AATACCAGCA GGCACACGAT GTGAAGAACC TATTTGTTGT CGATGCAGCA CCGTTCGTAT CGCAGGGTGA CAAAAACGTT ACCTGGACTA TTCTGGCCAG TGCAATGCGT ACTTCCCAGT ATTATATTGA CATGGTGAAG GCGAAAAGCA TTTAA
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Protein sequence | MDIPQLKKAP LVYDVAIVGS GAGGGMAAYM LAKAGAKVVL LEAGGYYDPA DPKYITQLKW PWESPRRGAS TEARSGGDFD AAWGGWEIDG EPYSAKSGTE FGWFRSRMLG GRTNHWGRIS MRFGPDDFRR RSLSGVGDDW PITYDDLKPY YDKVDRLIGV FGSVENFPNE PDGIFLPPPK PRLHELMIRK GARSIGIPVI PSRLSILTKP INKDRGSCFY CHQCNRGCQA YADFSASSVL CIPAVKTGNV TLINGAMVRE VLTDPQTGLA TGISYVNKHT LEEITVRAKA VMLGASTCES ARILLNSKSS RFPNGLANSS GVVGKYLNDS TGASRSAFIP ALMDRKRYNE DGVGGMHVFT PWWLDNKKLD FPRGYHIEYG GGMGMPGYGF GSGIESLNGM IPGRDGKTKT AGGYGASLKD DYRRFYGAYI GMSGRGEPVP LESNYCEIDP NSVDKYGIPT LRFHYKWSDY EVKQAKHMQD TFEEIIHAMG GIALGPKPGP NTAHGYGLAA PGRIIHEVGT VRMGNDPQKS ALNKYQQAHD VKNLFVVDAA PFVSQGDKNV TWTILASAMR TSQYYIDMVK AKSI
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