Gene Slin_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1354 
Symbol 
ID8725087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1649533 
End bp1650348 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content47% 
IMG OID 
Productfatty acid desaturase 
Protein accessionYP_003386203 
Protein GI284036273 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.149217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGTAC TGGCCGCGTT CATTGGGCAT TGGTATTTGT CCCTGTTCTG CCAAACCTTT 
TTCCTGCATC GTTATTCCGC CCATAAAATG TTCTCGATGA GCAAATTTTG GGAGAGGTTT
TTCTATGCAC TCACTTATGT TTCGCAGGGT TCGTCGTATC TGAGTCCACG AGCTTATGCC
GTGCTTCACC GGATGCACCA TGCCTTCAGT GACACTGAGA AAGACCCGCA CTCCCCGCAC
CATACGAAGA ACATCTTTAC CATGATGTGG AAGACGAAAG ATATTTATAA TGCTGTGCTT
CACCGCAAAC AGCCTGTAGA GCGGCAGTTT GACCGGAACT ACCCAGAATG GAGTTTCATC
GAAAAAGTGG GCGATTCGTG GGTGTCACGC GCTGGCTGGG CGGTGATGTA CAGCGTCTTT
TACATTTTCG CCTTTATCTA CCTCGATATG CACTGGGCGT TCTTTTTCCT GTTGCCTGTT
CACTTCGTAA TGGGACCTGT ACATGGCGCC ATCATCAACT GGAGCGGTCA CAAATACGGT
TACTCAAACT TCGACAATCA GGATCAATCA AAAAACTCGC TTATCTTGGA TGTAGTTATG
ATGGGTGAAT TGTTCCAGAA CAACCACCAC AAACGGCCTA ACGCAGCTAA TTTTGGTGCC
AAATGGTTCG AATTCGATCC TACCTTCCCC GTGATTGGCC TGTTGCACAA ACTGCATATC
GTTCGTTTAA GACCCTCTGC TGAAGCTAAA AAAGCGCAGT ATGAAGTTGG CCACGATCGT
CGGGTTGAAG AGGTGCAGAA AGAAGTAGAA GCTTAA
 
Protein sequence
MIVLAAFIGH WYLSLFCQTF FLHRYSAHKM FSMSKFWERF FYALTYVSQG SSYLSPRAYA 
VLHRMHHAFS DTEKDPHSPH HTKNIFTMMW KTKDIYNAVL HRKQPVERQF DRNYPEWSFI
EKVGDSWVSR AGWAVMYSVF YIFAFIYLDM HWAFFFLLPV HFVMGPVHGA IINWSGHKYG
YSNFDNQDQS KNSLILDVVM MGELFQNNHH KRPNAANFGA KWFEFDPTFP VIGLLHKLHI
VRLRPSAEAK KAQYEVGHDR RVEEVQKEVE A