Gene Slin_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1330 
Symbol 
ID8725063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1625802 
End bp1626071 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content40% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386179 
Protein GI284036249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.520904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.12078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTA TATCTATGTT TTATGGCCTG ATTGTTAGCT TGTATTATCT TGATAACAAA 
CAGCACCATC TTCCGCATAT CCACGTTCGT TACGGAGAAA TGGAAGCAGT ATTTACCATT
GAAAGTGGAG AGTTGCTGGA AGGGAAATTA CCAAAGGGCA AAATTAAACT AGTTGAAGCC
TGGATAGAAA TTCATCGGGA AAACCTGATG GCTGACTGGC AATTAGCCAT CAACGGTCAA
CGTGTTTTTC CAATTGATCC GCTAAAATAA
 
Protein sequence
MPVISMFYGL IVSLYYLDNK QHHLPHIHVR YGEMEAVFTI ESGELLEGKL PKGKIKLVEA 
WIEIHRENLM ADWQLAINGQ RVFPIDPLK