| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1321 |
|---|
| Symbol | |
|---|
| ID | 8725054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1617633 |
|---|
| End bp | 1619843 |
|---|
| Gene Length | 2211 bp |
|---|
| Protein Length | 736 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003386170 |
|---|
| Protein GI | 284036240 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.144185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.203515 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC TGAAACGCCT TGTCTCGTCG GTCACGTACC AACTCTACGC CAATGCCCTG
ATTCGGTGCC TGCTGCTGGC TATTTCGGCT TATTTTCTGA CCGCTACGTT TACAGGGCCG
TCGGTTGTAG CCGTTGTATT TGCCCTGGCC GGTTTTGGTG TCGGCGCTTT TCTGAGCAAG
CTGTATCAGG ATAAGAAACC TCAGGCCATT CGGCTTATTC ACCAGACCGT TGGTGATGTC
GAATATAGCT TACCCCTACT GACAAAACCG GAGCTTAATT TAGCCGAACA ACTGCAACTC
GACCGGCTTA ACACCCATAT TCAAAACGTA CGCATCCCGA TGGTCGTGCT GGCAAAAGCC
GGTGTATACG GACTGGTTTT ACTGGCAGCT TTAGGCGTTC ACTTCGGTTA TCCCTTATTA
AAGAACAATG ACCACAAAGA GCCTACTTCC AAAGGCTTTT TGTCAACGTT TACCCCCGAC
AAAAAAGCCG AGGCACCATC CTTCGAATCC GCTACCCTTC GTATTCAGCC CCCGGCATAT
ACCCGGCTTC CCGAAATGAA CTCGTCTAAT CTGAATGCGT CGAGTGTTGT TGGTGCGGTG
CTTTCGTGGC GTTTGCAGTT CAGTCATACC AACCAGCTTT CTGTTCGGCT GGTGAATAGT
CGTGGGCAGG AAATACCCTT TCGTCAAACC GGTGACGGGT ATACGTATCA GGATCGGCTG
ATTAACTCCG GCTTGTATGC CATTAAAGCC TATTGGCGAA CGGAAGGTAA AAAAGACTCG
GTCGTGTACC AATCTGACTT TTACCGGCTG GAAGCAAAAC CCGACCTGGC TCCCAAAATC
GACCCGGACT CGAAAGAGCT GTACCGGTTT CATACCATCA AAGACCCAAA AACGCTGACG
GTAGATGCCC GTATTTCGGA TGACTTTTCA GTCTCTAACA CATTCCTGGT AGCCACCGTG
GCGCGGGGAT CGGGGGAGAA TGTCAAGTTT CGGGAGGTGA AGTTTCCGTT AAGTCAGGCC
AATTTCAAAG AGGCAAGGCT AACCAAAACA CTCGATCTGA ACGAACTGAA ATTTGCCCCC
GGCGACGAGT TATATTACTA CTGGGCCGCC TTCGACAACC GTCAGCCTGA ACCCAATTTT
ACCAAGTCCG ACACTTATTT TCTGGTGTAT AAAGACACGA CTCAGGTAGA AGAAAGCGAG
CTGGCAACGA TGGCGGTGAA CATTATGCCC GAGTATTTCC GAAGTCAGCG GCAGATCATA
ATCGACACTG AAAAGCTGAT TGCCAGCCGG AAGCGCATGA CCGCTAAAGG AGTTGTCAGT
CATGCGTTTA AGAGCCAGTC CAACGAGATT GGATTCGACC AGAAAGTATT GCGATTACGT
TATGGCCAGT TTTTGGGCGA AGAGTTCGAG ACATCGGCCG GGGGCGGGCA TATTGAGCCC
ACCGATGACG ATGGCGACCC ACTCAAAGGG TTCGTTCACG CCCACGATAC CGGCGAGGAA
CACGGGGAAG CGCACTACGT TGAGGAGCCG CACCACGACC ACGGCCCCTC CGGCCCTGAG
AGTGACAAAG ACCCGGTAGC AGCCCTGATG GAGCAATACG TTCACTCCCA CGACAATGCT
GAAACCAACA CCTTTCATGA AGAATCGACC CGTTCGATTT TGAAAATGGC GTTGGAGCAA
ATGTGGCAAT CGGAGTTGCA CCTACGCATG TATGAACCCG AAAAAGCCCT GCCGTTTGAG
CAAAAAGCGC TGGAATACCT GAAAATCTCG CAGCAAAAGG CGCGGTCGTA CGTCAAGAAA
ACCGGTTTCG ATCCACCCCA GACAAAAGAA AAGGAAACCC GGCTAACGGG CGAGTTCAAA
AATGTGACAA CGGGCTTTAA TCAGGAACGG ATTTATTCGA AGGAGCGGAT TGAGTTGCTG
GTTGCGCAGG CTATCGGGTA TTTGGACCTG CCAACTCTGA ACACGCAACA GCGACAAACG
ATGCAACAAC TGGGTAATGC ACTGGCAAAC GGTGTTGTCA ATAGTGGGTT GCAAAACTGG
TCGGTGCTGG CTTCGCTACA AAAATTAGCG GGTGGAAAAT CGCTCAACCC CGCCGAAAAA
ACGCAGCTAA AATCAAAACT GTACTCGCTA ACGGGGGCGT CGGAGCGAAC CGGCCCAACG
TATGTCGGTG ATCGCGCCCT TCAACAAGCG TTCTGGCGAC ACATCAACTA G
|
|---|
| Protein sequence | MNELKRLVSS VTYQLYANAL IRCLLLAISA YFLTATFTGP SVVAVVFALA GFGVGAFLSK
LYQDKKPQAI RLIHQTVGDV EYSLPLLTKP ELNLAEQLQL DRLNTHIQNV RIPMVVLAKA
GVYGLVLLAA LGVHFGYPLL KNNDHKEPTS KGFLSTFTPD KKAEAPSFES ATLRIQPPAY
TRLPEMNSSN LNASSVVGAV LSWRLQFSHT NQLSVRLVNS RGQEIPFRQT GDGYTYQDRL
INSGLYAIKA YWRTEGKKDS VVYQSDFYRL EAKPDLAPKI DPDSKELYRF HTIKDPKTLT
VDARISDDFS VSNTFLVATV ARGSGENVKF REVKFPLSQA NFKEARLTKT LDLNELKFAP
GDELYYYWAA FDNRQPEPNF TKSDTYFLVY KDTTQVEESE LATMAVNIMP EYFRSQRQII
IDTEKLIASR KRMTAKGVVS HAFKSQSNEI GFDQKVLRLR YGQFLGEEFE TSAGGGHIEP
TDDDGDPLKG FVHAHDTGEE HGEAHYVEEP HHDHGPSGPE SDKDPVAALM EQYVHSHDNA
ETNTFHEEST RSILKMALEQ MWQSELHLRM YEPEKALPFE QKALEYLKIS QQKARSYVKK
TGFDPPQTKE KETRLTGEFK NVTTGFNQER IYSKERIELL VAQAIGYLDL PTLNTQQRQT
MQQLGNALAN GVVNSGLQNW SVLASLQKLA GGKSLNPAEK TQLKSKLYSL TGASERTGPT
YVGDRALQQA FWRHIN
|
|---|
| |