Gene Slin_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1316 
Symbol 
ID8725049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1613471 
End bp1614571 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content49% 
IMG OID 
Productglutamate--cysteine ligase GCS2 
Protein accessionYP_003386165 
Protein GI284036235 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0440674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.42446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTT TCACCCTTGG AATAGAAGAA GAATTTCAGA CAATAGACCC GGCTACGGGT 
GAGTTAAGGT CTCACATGTC GAAGATTGTC GACGGCGGTC AAATTGTTCT TCAGGAGCGT
GTAAAGGCCG AAATGCACCA GGCAGTCGTT GAGGTTGGTA CGAATATCTG CAATAATATT
CAGGAAGCCC GCCAGGAAGT CACGTATCTC CGAAAGATGA TCCTGGAGCT GGCCGATAAG
CAGAACCTAA AGATCGCTGC CGCCGGTACG CACCCTTTCT CAGACTGGCA GGAGCAGCTG
ATTACACCTA ATGAACGTTA CGATCGGCTC ATCGACGAGC TACGCGATGT GGCCCGCTCG
AACCTAATAT TTGGCCTGCA CGTACACGTG GGCATTGAAA ATCGGAACGA AGGCGTTCAG
ATCATGAACG CGGTACGGTA TTTTCTACCC CATATCTACG CCCTTTCGAC CAATTCGCCC
TTTTGGCGGG GCCGCAATAC GGGCTTCAAA TCGTATAGGT CTAAAGTATT TGACAAGTTT
CCCAGAACGG GTATCCCGGA TTTCTTTTCG TCGGCAGCGG AGTACGATGA GTACATCAAT
CTGCTGGTGA AAACCGGCTG TATCGACAAC GGCAAGAAAA TCTGGTGGGA CATACGGCTA
CATCCGTTCT TCGACACCAT TGAGTTTCGT ATTTGTGACG TACCAATGCG GGTGGATGAA
ACTATTTGTC TGGCGGCTAT CATGCAGGCA CTGGTGGCTA AAATTTATAA GCTTCACCAG
CAAAACCTCA ACTTCAGACC CTATCGTCGT ATACTGATCA ACGAAAACAA ATGGCGGGCC
GCCCGGTATG GTATTGAAGG TAAATTGATT GATTTTGGCA AGCAGATTGA GGTGCCAACC
CATGAACTGA TCCACGAACT GCTAAACTTT ATCGACGATG TTGTCGATGA ACTGGGTAGC
CGTGCCGAGT GCGAATATGT CCTTAAAATA TTGGAGATGG GCACCGGTGC CGACCGTCAA
TTAGCTGTTT TTCAACAGAC AAACGACCTC AAGCAGGTAG TCGATTACAT TGTAGAGGAA
ACTTCTTTCG GTATCAGATA G
 
Protein sequence
MPVFTLGIEE EFQTIDPATG ELRSHMSKIV DGGQIVLQER VKAEMHQAVV EVGTNICNNI 
QEARQEVTYL RKMILELADK QNLKIAAAGT HPFSDWQEQL ITPNERYDRL IDELRDVARS
NLIFGLHVHV GIENRNEGVQ IMNAVRYFLP HIYALSTNSP FWRGRNTGFK SYRSKVFDKF
PRTGIPDFFS SAAEYDEYIN LLVKTGCIDN GKKIWWDIRL HPFFDTIEFR ICDVPMRVDE
TICLAAIMQA LVAKIYKLHQ QNLNFRPYRR ILINENKWRA ARYGIEGKLI DFGKQIEVPT
HELIHELLNF IDDVVDELGS RAECEYVLKI LEMGTGADRQ LAVFQQTNDL KQVVDYIVEE
TSFGIR