Gene Slin_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1301 
Symbol 
ID8725034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1596519 
End bp1597190 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content48% 
IMG OID 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_003386150 
Protein GI284036220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAGGC CCGCCAGTTT TTGGGTAAAA AATAGTATTT GGTTTACCCT GCTCTGTATC 
AGTAGCCTGC TTGAGGCCTG CACCGGATCG TCCGGAGACA GCCTTCCTAT TTTAGGCCAG
CGGGAGGCCG TAACTAAAGT GGTAAATGGT AAATCCGTAA CCGATTCTGT TTACCAGTCG
ATTCCAGACT TCAGCTTTGT GAGTCAGTTT GGCGATACGG TTACGGCCAA AACCCTTGAT
AACAAGATCT ACGTAGCTGA TTTTTTCTTC ACCAGCTGCC CGACTATATG CCCCAAAATG
AAGGTTCAAT TAAAACGGGT ATATGAAAAG TTCAAGGGTA ATCCGGATGT TATGCTCCTG
TCGCACACCA TTGACCCGGC TCACGATTCG GTGGCTGTTC TGAAAGAATT TGCGCAAAAT
CTGGGAGTTA CAGGCCGCCA ATGGCTTTTT GTAACGGGCG ACCGGGAGAA GATTTACGAC
ATCGGTCAGA ATAGCTACAT GGTTACGGCC CAGTCCGACT CTACTGCACC CGGTGGCGTT
GTGCATAGCG GAGCGTTCAT TCTGGTCGAC AAAGCCAAAC ACATCCGTGG TATCTACGAC
GGCACTACCG AAGACGGTGT CGATAAATTA ATGAATGACA TGAATCGGTT ATTGGCCGAG
TATAAAAAAT GA
 
Protein sequence
MNRPASFWVK NSIWFTLLCI SSLLEACTGS SGDSLPILGQ REAVTKVVNG KSVTDSVYQS 
IPDFSFVSQF GDTVTAKTLD NKIYVADFFF TSCPTICPKM KVQLKRVYEK FKGNPDVMLL
SHTIDPAHDS VAVLKEFAQN LGVTGRQWLF VTGDREKIYD IGQNSYMVTA QSDSTAPGGV
VHSGAFILVD KAKHIRGIYD GTTEDGVDKL MNDMNRLLAE YKK