Gene Slin_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1300 
Symbol 
ID8725033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1596103 
End bp1596522 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content44% 
IMG OID 
Productcytochrome c class I 
Protein accessionYP_003386149 
Protein GI284036219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.793758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGAC TGATCGGATT TTTAGTAGCA GGGCTTTTTC TTATCAACTT GCTTTCCTGC 
CAGAGCGACG AAGAAATTAA ACGGCAACGG TACATTACCG AAGGCATTTT TCTCTATAAA
AACAACTGTG CCAACTGCCA CCAGAATAAG GGAGAAGGTT TGGCCGCTCT TTACCCGCCC
ATTGCGGGAT CAGATTATCT GAAAGACAAG AAACGTGTCA TTTGTTTGAT TCGGTACGGC
CAAAAGGGCC CTATTGTGGT TAACGGGAAA CCGTACAATC GCCCAATGCC TGCCCAACCA
CAGCTGAGTG ATCTCGAAAT AGCCGAAATT GTCACATATA TTTATAAAGA ATGGGCTGGC
GAAACGAAGA TAACCGACGT TAAAGCCGTA ACACCAATTC TCGAACAGTG TAAACAGTAA
 
Protein sequence
MIRLIGFLVA GLFLINLLSC QSDEEIKRQR YITEGIFLYK NNCANCHQNK GEGLAALYPP 
IAGSDYLKDK KRVICLIRYG QKGPIVVNGK PYNRPMPAQP QLSDLEIAEI VTYIYKEWAG
ETKITDVKAV TPILEQCKQ