| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1295 |
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| Symbol | |
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| ID | 8725028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1590490 |
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| End bp | 1592742 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_003386144 |
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| Protein GI | 284036214 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.623564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGA AAGAAGAATT AGACATGAAG CTTCTCTCGG AGCTTCACCC CATTGCCGAG
CAATTTGGCA TTCGTAATAT CAGCAAATTC ACAAAAGAAA AACTCGTTTA CGAAATCATA
AAGCAACAGT CTGAAAGCCC GGTAGCTGTT GAGGAAACGC CTTCTGTAGA AGAGGCTCCA
CGTCGCGGAC GGCGTACAAA AGCTGTTACA TTAGCTGATG CAGCCCCGGT TAACCTTCCT
GTCGAAAATA CAGCTGTAGA AAAAACAACG GCGATTCCTG CCGCAGAAAC ACCCTCTCCC
GAGCTTGCTA AACCTCGTCA GCGGGGTCGA CGTGAGCGCG ATGCAGCGGA AACGGTGACA
GTCTCCGAGC CCCCAGTGGC AGAAGAGAAG CCTGTAGACG TGAACGCCAT AACGGCTTCG
CCCGCTACAG AGCAGACAGC ATCTGCCCCG GCTGCGGCTC CAGCTTCATC CAGTGAAAAC
ATAACCGCTG AAACAGCGCC TGAAAATCCC CAGCCAGTAC GTCAACCCCG TGAAAATCGG
GAACGTATTG TAAATCCGGG GCAACGGCCT AATTCGTTTA ACCAGCCCGT TCGCAATCGT
AATGAAGGCG AAGGCTCACC ATCTGACCGT AATTTCCGGA CACCCCCACC CCGTAATGAC
CGCAATGGGA ACGGCCGACC GGACTTAAAC CAGCAGCGCA ACCCTCGGCC GGATGGCTCA
TCGCAAGGCC CACGAGATGC CCGCCCTCGT TTTGATGCGA ACCGCGACCG AAATGGTAGC
GATAGCCCAC GCGACAATTC TCAACGCCGG GACCAACGGC CCCGCACCCA GCGTATCGTA
ACCGATGAGT CGGGCCTGAA CTATGGTGGT CAGGCAGATG AGGAATTCAT GACACCAACG
GTTGTTACGG AAGACAACGC GGCAAACATG CAGACAGCAG GCCAGTCAGT TGCCGCAGAA
ACAACCGCCG TCGTCGAGCC GGCAGGGGCA CCGGCCGAAT CACAGGAAGG ACAGCCTCAG
TCGGAATCCG GTCAGAGCGA TCAGCCTGCT CAACCTCAGC TTTCGCAACC TTTGCGGGAA
GCTCAGGAAT ACCAGAATCG GATAAGAAGG CAGTATAACC AGCATATTCG CGAATTCGAT
GGTATCATCG ACAACGAAGG TGTGCTGGAA ATCATGCAGG ATGGCGGCTA CGGCTTTCTG
CGCTCTGCCG ACTACAACTA CTTAGCCAGC CCCGATGATA TTTATGTATC TCCTTCGCAG
ATCAAGCTCT TTGGTCTGAA AACCGGTGAT ACCGTACGGG GTGCCATTCG TCCGCCCAAA
GAAGGCGAAA AGTATTTTGC GCTGCTTCGT GTATCGACGG TTAACGGCAA AACGACGGAG
GAAATCCGGG ATCGGATTCC GTTTGAGTAC CTAACCCCAC TTTTCCCCGA AGAACAACTA
CATTTGAGCA ACCGCCCGGA GAACTACTCC TCACGTGTGT TGGACTTGTT TGCTCCTATT
GGTAAAGGCC AGCGCGGTAT GATTGTTGCT CAGCCCAAAA CTGGTAAAAC AGTTCTTCTT
AAAGAAATTG CCAACGCCAT TACGAAAAAT CACCCGGAGG TTTACCTCAT CGTTCTGCTG
ATTGACGAAC GTCCCGAGGA AGTAACCGAC ATGGCGCGCA GTGTAAACGC CGAAGTAATT
TCATCCACCT TCGACGAACA GGCCGACCGG CACGTGAAGG TATCGAGCAT GGTGCTTGAA
AAAGCGAAAC GGATGGTTGA GTGCGGTCAT GATGTAGTTA TCTTATTGGA TTCGATTACA
CGTCTGGCGC GGGCTTATAA CACTGTCGTT CCATCGTCGG GCAAGATTCT GTCAGGTGGT
GTCGACGCGA ATGCGCTGCA TCGGCCCAAG CGTTTCTTTG GTGCGGCCCG AAATGTTGAG
AATGGCGGTT CGCTTACCAT TATCGCTACG GCGTTGATTG ATACGGGTTC TAAAATGGAC
GAGGTTATCT TTGAGGAGTT CAAAGGTACC GGCAACATGG AACTTCAGCT CGACCGCAAA
CTGGCTAACA AACGCGTTTA TCCGGCTATC GATGTTATGG CATCGGGTAC GCGCCGTGAA
GACCTGTTAC TGGATAAAGA GACGTTGCAG CGTGTCTGGA TTCTTCGTAA GCATATGGCA
GACATGAATC CTATGGAAAG CATGGATTTT CTGCTAGGCC ATATGAAAGG TACTCGGAGC
AATGAAGAGT TTTTAATCTC AATGAACCGA TAG
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| Protein sequence | MFKKEELDMK LLSELHPIAE QFGIRNISKF TKEKLVYEII KQQSESPVAV EETPSVEEAP
RRGRRTKAVT LADAAPVNLP VENTAVEKTT AIPAAETPSP ELAKPRQRGR RERDAAETVT
VSEPPVAEEK PVDVNAITAS PATEQTASAP AAAPASSSEN ITAETAPENP QPVRQPRENR
ERIVNPGQRP NSFNQPVRNR NEGEGSPSDR NFRTPPPRND RNGNGRPDLN QQRNPRPDGS
SQGPRDARPR FDANRDRNGS DSPRDNSQRR DQRPRTQRIV TDESGLNYGG QADEEFMTPT
VVTEDNAANM QTAGQSVAAE TTAVVEPAGA PAESQEGQPQ SESGQSDQPA QPQLSQPLRE
AQEYQNRIRR QYNQHIREFD GIIDNEGVLE IMQDGGYGFL RSADYNYLAS PDDIYVSPSQ
IKLFGLKTGD TVRGAIRPPK EGEKYFALLR VSTVNGKTTE EIRDRIPFEY LTPLFPEEQL
HLSNRPENYS SRVLDLFAPI GKGQRGMIVA QPKTGKTVLL KEIANAITKN HPEVYLIVLL
IDERPEEVTD MARSVNAEVI SSTFDEQADR HVKVSSMVLE KAKRMVECGH DVVILLDSIT
RLARAYNTVV PSSGKILSGG VDANALHRPK RFFGAARNVE NGGSLTIIAT ALIDTGSKMD
EVIFEEFKGT GNMELQLDRK LANKRVYPAI DVMASGTRRE DLLLDKETLQ RVWILRKHMA
DMNPMESMDF LLGHMKGTRS NEEFLISMNR
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