Gene Slin_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1294 
Symbol 
ID8725027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1589457 
End bp1590353 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content50% 
IMG OID 
Productfatty acid hydroxylase 
Protein accessionYP_003386143 
Protein GI284036213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.443981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATC TAATCCAGTA CGCCATTCCC GGATTCATAA TTCTGCTTGT TACCGAAGTT 
ATTCTGACTG CAATTCAGCA TAAGGATTAC TACGACCGTA AGGACACGTT CAGTAGCCTG
AGCATGGGGA TAGGTAATGT CATTATCGGG TTTGTCGGCA AGGCTATTGT ATTTAGCGCC
CTTTCGCTGG TCTATCAGTT TCGGCTGTTT ACAATCGATA TGACCCTATG GTGGGCCTGG
TTAATCCTGT TTTTTGCGGA TGATTTCAGC TACTACTGGT TTCACCGGAT CAGCCACAGC
AGCCGGTATT TCTGGGCATC GCACGTAGTG CATCACTCCT CAATGAAGTA TAACCTGGGT
ACGGCACTCC GCCAAACCTG GACGGGTAAC ATAACAGGTA CCTTCGTGTT CTGGTTATGG
CTGCCCCTCG TCGGCTTTTC GCCAGTGGCG GTTATGACCA TGCAATCCAT AAGTCTGCTG
TATCAATTCT GGATTCATAC AGAGCATATT AACAAGTTGC CAGCCCCCAT TGAATTTATT
TTCAATACGC CCTCACATCA TCGGGTACAC CACGGATCGG ACCTCGATTA CCTGGATAAA
AACCACGCGG GTGTCCTCAT CATCTGGGAC CGCATCTTCG ATACCTTTGC CCCGGAGCAA
AACCGTCCAA CCTATGGACT AACCACCAAT ATCCATTCAT ACAACCCCGT CCGAATTGCC
TTTCACGAAT GGGTATCCAT CGGTCAGGAC CTGCGACGTG CACCGTCGGC ACGAGCTGCG
TTGCGGTATC TCTTCGGCCC GCCGGGCTGG AGTCATGATG GCTCCCGAAG AACGACCAAG
CAACTCAGGC AGAAACCCGT ATCTCTCCAA GCACATGAGA GAGCCCCTTC ACTATAG
 
Protein sequence
MRDLIQYAIP GFIILLVTEV ILTAIQHKDY YDRKDTFSSL SMGIGNVIIG FVGKAIVFSA 
LSLVYQFRLF TIDMTLWWAW LILFFADDFS YYWFHRISHS SRYFWASHVV HHSSMKYNLG
TALRQTWTGN ITGTFVFWLW LPLVGFSPVA VMTMQSISLL YQFWIHTEHI NKLPAPIEFI
FNTPSHHRVH HGSDLDYLDK NHAGVLIIWD RIFDTFAPEQ NRPTYGLTTN IHSYNPVRIA
FHEWVSIGQD LRRAPSARAA LRYLFGPPGW SHDGSRRTTK QLRQKPVSLQ AHERAPSL