| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1293 |
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| Symbol | |
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| ID | 8725026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1588065 |
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| End bp | 1589393 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003386142 |
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| Protein GI | 284036212 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.803504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGGT TACGCTTAAC TACATGTTCC GCTTTTGCAC TCATCGCCTT TTGGCTGTGC
ACATTGTCTC CTTTGCTGGC GCAAACACCG GTAGCCAGTA CTTTGCCGGA TACCATTCGG
CAAAGTCTCC CTCAACTCGA GCAGCAGTTT CTGGAGCGAA ATTTCCAGCT TATTGCCCAG
CGTTATCAAA TTGATATTGC CGTTGCCGCC ATTACACAGG CAGGGTTGCG GCCTAATCCA
AATTTATGGT TTCAGGGTAA TCTCTTTAAC CCGAACACGG GGAAGGTGTT ACCGTATGGG
CCGCCAAGCC AGGCCGATAA AAATGCCGGC ATCTATAATA GCGGCTATTA TGCCGTTCAG
ATACAGCAGG TTATCTTGCT GGCGGGTAAG CGCAGTAAGC TGGTTGCCCT GGCTGAAAGT
AACAAGTCTT TGTCCCGGCT GGCATTTCAG GATGTCATGC GGACACTCCA CTACCAGCTA
TACACCACGT ACGCCAACTT ATATTATGAC TTGCAGGTTC TGCGTCTGTT TGACGATGAA
CTGGCTCGTC AGCAGCGGCT ACTTGAATCA TATCGGATTG TTCTTCGAAC CGGAGGTGTG
CCAGCGTATG AAGTGACCCG ACTGGAAGTG GCTATCCGTG ACTTGCAGGC CAACAGTGCT
AATTACCGCA CACAAATTGC TGATGAGCAG GCTACGCTGC GGGTTTTGTT GCGTCAGCCT
GCCGGTACGT TCATTCTGCC AACCGAACTG CCTCCCTTAA AGACCACGCT CCCTGCTCTG
GCAACGGCGC TCGACTCTGC TCTGACGAAT CGACCCGACA TTGGCCTGTC GCAGGAGCAG
ATCAATAATG CCGAGCGAAG CCTTGCGCTC GAAAAAGCCC GCCGTACGCC AGACCTGACG
ACTGGACTGT TATTTGAAAA GTATGGGAAT GCCTATAATA ACTTTACCGG CTTCCAGCTA
GCTATGGATT TGCCGGTTCG TAACCGCAAT CAGGGGGCTA TCCGATCGGC GGAGACGACC
CTGAAAAGCG TGACGGGTGG ATTGGAAAAT CAGCAAACGA TTGTTCAAAG CGATGTGCTG
AATGCCTATG ATAAGCTGAA AACCTATTAT GAGCAACTCA ATACCCAGCC TGAAGGGTAT
CTGGACCGAA TCCGAAATAT TTCGGTAGAA GCTACGAAAG CCTACAATGC ACGAACCATT
GGTTTGCTGG ATTATCTGGA CAAAATCAGG ACGTATCAGC AGGCGCAATT GAACAATATT
AACCTTCTTA ATAACTTGTA CAATACCCAG CAGTTGGTTA ATTACACCAC CAGTACGCGC
TTCTTTTAG
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| Protein sequence | MNRLRLTTCS AFALIAFWLC TLSPLLAQTP VASTLPDTIR QSLPQLEQQF LERNFQLIAQ
RYQIDIAVAA ITQAGLRPNP NLWFQGNLFN PNTGKVLPYG PPSQADKNAG IYNSGYYAVQ
IQQVILLAGK RSKLVALAES NKSLSRLAFQ DVMRTLHYQL YTTYANLYYD LQVLRLFDDE
LARQQRLLES YRIVLRTGGV PAYEVTRLEV AIRDLQANSA NYRTQIADEQ ATLRVLLRQP
AGTFILPTEL PPLKTTLPAL ATALDSALTN RPDIGLSQEQ INNAERSLAL EKARRTPDLT
TGLLFEKYGN AYNNFTGFQL AMDLPVRNRN QGAIRSAETT LKSVTGGLEN QQTIVQSDVL
NAYDKLKTYY EQLNTQPEGY LDRIRNISVE ATKAYNARTI GLLDYLDKIR TYQQAQLNNI
NLLNNLYNTQ QLVNYTTSTR FF
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