| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1289 |
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| Symbol | |
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| ID | 8725022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1584896 |
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| End bp | 1585843 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | Helix-turn-helix type 11 domain protein |
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| Protein accession | YP_003386138 |
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| Protein GI | 284036208 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.447111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTC TCGACCGCTT AACGGCTATC CTGATTCATC TGCAAACCAA GCGAGTTATT
CGCGCCCAGG AATTGGCCGA CCGGTTTGGT ATCAGCCTTC GTACGGTTTA CCGCGATGTC
CGGTCACTGG AAGAAGCGGG CGTTCCCATA GGGGCTGAAG CAGGCGTTGG TTATTTTCTT
ACCGATTACA ACCTGCCTCC GGTCATGTTT ACAAATGCCG AAGCGAGTGC ACTACTTTTA
GGAGGCAAAC TAATTGAAAA ATGGACGGAT CAATCCGTTA GGACAGAGTT CGAATCGGCG
TTATATAAGA TCAAATCCGT TTTAAAACGC CCAGATCAGG AACATCTTGA TAGTCTGGAG
GCCCATATCA ACGTTGCGAA GCCTTTATAC CCGACAACCG AAGGTGAAGG CTCACTCAAT
AAGATTCAGC ATGCTATTGC GCAGCAGCAT GTGCTGGACC TTCAATACCA TTCGAATTAT
AACAACGCCG AAACCCAGCG CCGGGTTGAG CCCGTGGGGC TGTATCATTA CCGCATGAAC
TGGCACTTGA TTGCATTTTG TCAAATTCGG CAGGATTACC GGGACTTTCG CGTGGATCGC
ATTCGCCAAC TTACCGATAC AGCCGAACGT TTTTCGCGAC GGGAGCATCT ATCGTTGCAG
GAATACCTCG ACCGTGTTGG CAAGCAAGAT TTGCCCATCA TGGAAGCTAC GATTGTTTTT
AAGAAACTGG CTACCCGGTT TATGCACGAG CAAAAGTATG CCTATGGTTT TCAGCACGAA
GAAGATCTTG GAGACCTTGT CCGTATACAC TTTCAAACAC CCTATCCTGA AGGATTGGCC
CGCTGGCTAA TCATGTATGG CAATCAAGCC AAGGTTGAAC AACCCAACTC GCTGAAAGTT
ATGATTCGAA CACTAGTAGA TGAATTACAT ACTCACTATA CTACGTAA
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| Protein sequence | MNRLDRLTAI LIHLQTKRVI RAQELADRFG ISLRTVYRDV RSLEEAGVPI GAEAGVGYFL
TDYNLPPVMF TNAEASALLL GGKLIEKWTD QSVRTEFESA LYKIKSVLKR PDQEHLDSLE
AHINVAKPLY PTTEGEGSLN KIQHAIAQQH VLDLQYHSNY NNAETQRRVE PVGLYHYRMN
WHLIAFCQIR QDYRDFRVDR IRQLTDTAER FSRREHLSLQ EYLDRVGKQD LPIMEATIVF
KKLATRFMHE QKYAYGFQHE EDLGDLVRIH FQTPYPEGLA RWLIMYGNQA KVEQPNSLKV
MIRTLVDELH THYTT
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