| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1275 |
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| Symbol | |
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| ID | 8725008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1563466 |
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| End bp | 1564848 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003386124 |
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| Protein GI | 284036194 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.583707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TAACCGTTTT ACTAGCCTTT GTTATTGGGC TTTCGGCCTG CCGGAAAGAT
TTTCTGGACT TAAAGCCGCT GTCGCAGCCC AACGCCGATA ATTTTTACAA AACTGCCAAC
GACTTCGGCA ACGCGGTCAA TGGTGCCTAC GATGCGCTCC AGAGTCCGAG CCAGTACGGG
GGCGATTACA ACACAATCGT GGAGGCCAGA AGTGATAATG TTCTGGATAA CGACCCCTCA
TCGAGTGCCG GACTGCGCTA CAACATCGAC CGGTTCATTG AACCAACCAC CAACTCGGTC
CTGCGGGATA CCTGGGGAAG TCTGTACACT GGTATCAACC GTTGCAACCT GATACTGGAC
AAGATTGATG CCGTGTCGAT GGATGCGACG CTGAAAGCCC GTTACAAAGG GGAGGCCCAG
TTTATCCGGG CGTTGTCATA TTTCAACCTT GTTCGGTTGT GGGGGAAAGT GCCGCTTGTA
TTGAAAGCCG GTTCTACCAC CGAGGCCCGG TCGTATGTGC GCAACGAGGT AACCGACATT
TATGCCGCTA TTGAAAAAGA CCTCACCGAT GCAGCTGCCG GTTTACCCGC CACGTATACA
GGGGTGGACG TTGGCCGGGC TACGTCGGGT GCCGCCAAAG GCTTGCTGGG TAAGGTGTAT
GTGACGGAGA AAAAATACGA CCTGGCCGTG GCGACGCTAA AAGATGTGGT GAACGGAACT
ACCTATCGGC TGCTGCCCAA TGTAGCCGAT GTCTTTCTGG TCAGCAACAA GAACAATGCG
GAAATACTGT TCGCGGTGAA GTTCAAAAAA GGCGGTTTGC AGGGCGAAGG GCACGGTTCC
TGGTACGGTA CCAGCATTGG CGATAACATT GAACCCTCTC TGCGGGCGGC CTATCTGCCG
ACTGATAAGC GGCTTCCGCT GACGGTTCAG GTGCCGGTAC CAACCAGTAT CAACGCCGTG
CCCCGGAAGT TCTACGATGA ACTGTCGGGG ACGAACGACG TGGGCAATGA CTTCCCGGTG
TTGCGCTTTG CCGATGTACT GCTGTTGTAT GCCGAAGCAC TGAACGAAGT GGGGTATCAG
GCCGATGGAG AGGCATTTCG GACGCTGAAT CTGGTGCGTA CGCGGGCGGG TGTTTCTAAC
TATACCAGTG CGGAACTAGC TACCAAAGAG GCTTTCCGCA CGGCGGTCAT CAACGAACGT
CGGCTGGAGC TGGCGCTCGA AAATGACCGC TGGTTTGACC TGATTCGCAC CGGAACGGCT
GTTGAGGCTA TCAAAGTAAC GGGTATCACC ATGCCTGCTT ACCGGACGCT GTACCCGATT
CCGCAGTCAG AAATCGACAC GTATAACAAC AAAACAACCT TCCCGCAAAA TCAGGGTTAT
TAG
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| Protein sequence | MKKITVLLAF VIGLSACRKD FLDLKPLSQP NADNFYKTAN DFGNAVNGAY DALQSPSQYG
GDYNTIVEAR SDNVLDNDPS SSAGLRYNID RFIEPTTNSV LRDTWGSLYT GINRCNLILD
KIDAVSMDAT LKARYKGEAQ FIRALSYFNL VRLWGKVPLV LKAGSTTEAR SYVRNEVTDI
YAAIEKDLTD AAAGLPATYT GVDVGRATSG AAKGLLGKVY VTEKKYDLAV ATLKDVVNGT
TYRLLPNVAD VFLVSNKNNA EILFAVKFKK GGLQGEGHGS WYGTSIGDNI EPSLRAAYLP
TDKRLPLTVQ VPVPTSINAV PRKFYDELSG TNDVGNDFPV LRFADVLLLY AEALNEVGYQ
ADGEAFRTLN LVRTRAGVSN YTSAELATKE AFRTAVINER RLELALENDR WFDLIRTGTA
VEAIKVTGIT MPAYRTLYPI PQSEIDTYNN KTTFPQNQGY
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