Gene Slin_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1272 
Symbol 
ID8725005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1557606 
End bp1558685 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content50% 
IMG OID 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003386121 
Protein GI284036191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCAGC CAGAGAACAG AAAAATTATT CACATCGACA TGGATGCTTT TTATGCATCT 
GTTGAACAGC GGGATAATCC TGAATTACGA AATAAACCCC TGGCCGTTGG GGGTTCCCGG
CAACGGGGCG TGGTAGCTGC GGCCAGCTAT GAAGCCCGCC AGTATGGCGT CCGGTCGGCT
ATGGCTTCGT CTATCGCCCT TCGAAAATGC CCAGATTTAC TGTTTGTTAA ACCTCGCTTT
GACGTTTACA AAGCCGTTTC CAGCCAAATT CGGGCTATCT TCGCCCGTTA CACCGATCTG
ATCGAACCGC TTTCGCTGGA CGAAGCTTAC CTGGATGTTA CGGATACACT ACCAGTTAAT
TCATCGGCTA CCCAGATTGC TCAGCTCATA AAAGAGCAAA TCAAAGAAGA GACCCTTCTT
ACGGCATCGG CGGGTGTTTC ATACAACAAA TTTCTGGCAA AACTAGCGTC TGATTATCGA
AAGCCGGATG GGCTGTATGT CATTAAGCCG CATCAGGGGC CTGGTTTCGT GGAGGGCTTA
AAGGTTGGTC AGTTTCATGG CATCGGCCGT GTAACAGCCG GGAAGATGAA CCAGCTTGGT
ATCTATACCG GTTTGGATTT GCGGGAGCAG ACAGAAGCCT TTCTTACGCG GCACTTTGGA
AAAGTGGGCT TCCATTATTA CTCCATCGCA CGGGCTATCG ACCATCGACC CGTGACGCCC
AATCGAATTC GTAAATCGGT TGGGTCCGAA AATACTTTCG CCGATGATTT AATGGACCAG
GCCCAACTGA TTGATCAGTT ATTACCGTTG GTCGATAGTG TCTGGAGTTA CTGCGAACGA
ACCTCTGTGC GGGGCAGAAC CCTTACGCTG AAAGTGAAAT ATGCCGATTT TGAACAGATT
ACCCGCAGTC GCACAGCGCT AAATCTGCTT TCGAGTAAAA CCACCCTAAT GCAGATTGCC
GCTGATTTGT TGGAGACGCT TTTTCCGCTC CCGAAAGGTA TCCGATTGCT GGGCGTGTCG
TTATCGAATC TTCATCCGGG CGAGCGGCCG GAAAATGGGC AGCTCACACT CGACTTATAA
 
Protein sequence
MKQPENRKII HIDMDAFYAS VEQRDNPELR NKPLAVGGSR QRGVVAAASY EARQYGVRSA 
MASSIALRKC PDLLFVKPRF DVYKAVSSQI RAIFARYTDL IEPLSLDEAY LDVTDTLPVN
SSATQIAQLI KEQIKEETLL TASAGVSYNK FLAKLASDYR KPDGLYVIKP HQGPGFVEGL
KVGQFHGIGR VTAGKMNQLG IYTGLDLREQ TEAFLTRHFG KVGFHYYSIA RAIDHRPVTP
NRIRKSVGSE NTFADDLMDQ AQLIDQLLPL VDSVWSYCER TSVRGRTLTL KVKYADFEQI
TRSRTALNLL SSKTTLMQIA ADLLETLFPL PKGIRLLGVS LSNLHPGERP ENGQLTLDL