| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1258 |
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| Symbol | |
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| ID | 8724991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1540999 |
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| End bp | 1543338 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003386107 |
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| Protein GI | 284036177 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.539798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAA AGAGAATCAG TATCGGTTTA CTCAGCCTGC TTACGGCATC CGTCACCTTC
GGGCAGAACT GGACAGAGAG CAAGACGGGC AACTGGGTGA AAGTGACGAA TAAGGGTGGT
CAAACGCTGG GTTACTCGCT CGCATCGGGT GTGAAGCTGC TATCCGACAA AGGGTTAGCG
TTCAAAGATT TAAACAAAAA CGGGAAGCTG GATAAATACG AAGACTGGCG TTTGCCGGTC
GAGGTGCGGG CGAAAGATCT GGCTTCCAAA CTCAGCGTCG AACAGATTGC CGGGTTGATG
CTCTACAGCA AACACCAGCC GATTCCGGCT GCGGCTGGCG GACCGTTTGC GGGCACGTAC
AACGGTAAAA TCTTCGCGCA GAGCGGAGCC AATGTGTCAG ATCTGTCGGA TCAGCAACGG
GAGTTTCTGA CGAAAGATAA CCTCCGGCAC GTTCTCATTA CTTCGGTTCA AAGTCCGGAA
GCGGCTGCGG CCTGGAACAA CAATGCCCAG GCATTAGTGG AAGGGCTGGG CGTGGGTATT
CCTATAAACA GCAGCTCCGA TCCGCGTCAC GGTACTCGTG CCGATGCGGA ATTCAACGCC
GGAGCGGGCG GGACCATTTC CATGTGGCCC GGCTCGCTGG GTCTGGCCGC TACGTTCAGT
CCTGAACTGG TGCAGAAATT TGGTCAGATT GCGGCTACGG AATACCGGGC CTTAGGCATT
GCCACGGCGC TTTCTCCACA AGTGGACCTC GCCACCGACC CCCGCTGGAA CCGGGTGAGC
GGCACATTTG GTGAAGACCC GAATCTGGCA ACGGACATGG CTCGTGCGTA CATCGACGGT
TTTCAAACCT CGACCGGAGC GAAGGAGATC ACCGGCGGCT GGGGCTATGC CAGTGTCAAC
GCCATGGTGA AACACTGGCC GGGTGGCGGC TCGGGCGAAG GTGGGCGTGA TGCGCACTAC
GGGTACGGCA AATACGCGGT TTATCCCGGT AACAATTTTC AGACCCACTT CATGCCTTTC
CTCAATGGCG CCTTCAAACT GAAAGGGAAA ACGGGCATGG CGTCGGCCGT GATGCCATAT
TACACCATCT CGTACAACCA GGACAAAAAG TACGGCGAAA ACGTGGGCAA CAGCTACAAT
AAATACATCA TCAATGACCT GTTGCGGACG AAATACAAGT ACGACGGTGT GGTTTGCACC
GACTGGCTAA TCACCGCCAA TGAAACCGCT GTCGATGTGT TCCTGACGGG TAAGTCGTGG
GGTGTCGAAA AATTGTCTGT TGCCGAGCGG CATTACAAAA TTCTGATGAA CGGCGTTGAT
CAGTTTGGTG GTAACAACGA AGCCAAACCC GTCACGGATG CCTACCAAAT GGGCGTTAAA
GAGCATGGCG AAGCGTTCAT GCGCGCCCGG TTTGAGCAGT CGGCAGTGCG GTTGCTGAAG
AACATTTTCC GCGTTGGGCT CTTCGAAAAT CCGTATCTCG ACCCGCAGGT GTCGCAGAAA
ACCGTGGGTA CACCCGAGTT CATGAAAGCC GGGTATCAGG CACAGCTGGA ATCGGTGGTG
ATGCTCAAGA ACAAGGCCAA GACGCTGCCC CTCACCAAAG GCAAGACGGT TTACATTCCC
AAGCGGTTCA CGCCAGCGGG CCGTAACTTC CTGGGTATGC AAACGCCCGA AAAACTGGAT
TATCCGGTCA ATCTGGCGGT CATCAAAAAA TACTTTACCG TGACCGACAA CCCCGCCGAA
GCCGATTACG CGCTGGTCTT TATCCAAAGC CCCGATTCGG GGGGCGGGTA CAGTTCTGAA
CAAGCAAAAG CGGGCGGAAC GGGCTATGTT CCGGTGAGTT TGCAGTACGG CGACTATACC
GCTCAGGGCA CCCGCGACCC AAGTATTGCG GGTGGTGACC CGATGGAGAA GTTCACGAAC
CGGACGTACA CTGGCAAAAC GGCCAAAACC ATCAACAGCA GCGACCTGAC GATGGTTACC
GAAACCTATG CCAAAATGAA CGGCAAGCCG GTAATTGTGG CCCTTCAGGT AGCCAATCCA
ACAGTGGCAA AAGAGTTCGA AGCGCAATCG AGTGCTATTC TAGCGCATTT TGGTGTGCAG
GATCAGGCCT TGCTGGAGAT CATGACGGGC GCGCATGAGC CATCGGCTCT GTTACCGATG
CAGTTCCCCG CCGACATGAA AACGGTGGAA GCGCAGGCCG AAGACGTTCC CCGCGACATG
GCTGCTTACA AAGATTCTGA AGGGAACACC TACGATTTCG GCTTCGGCCT GAACTGGAAA
GGCGTCATTC AGGATGCCCG CACGGCTAGG TACAAAAAGC CCGTTTTGAG TATGAAATAG
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| Protein sequence | MRKKRISIGL LSLLTASVTF GQNWTESKTG NWVKVTNKGG QTLGYSLASG VKLLSDKGLA
FKDLNKNGKL DKYEDWRLPV EVRAKDLASK LSVEQIAGLM LYSKHQPIPA AAGGPFAGTY
NGKIFAQSGA NVSDLSDQQR EFLTKDNLRH VLITSVQSPE AAAAWNNNAQ ALVEGLGVGI
PINSSSDPRH GTRADAEFNA GAGGTISMWP GSLGLAATFS PELVQKFGQI AATEYRALGI
ATALSPQVDL ATDPRWNRVS GTFGEDPNLA TDMARAYIDG FQTSTGAKEI TGGWGYASVN
AMVKHWPGGG SGEGGRDAHY GYGKYAVYPG NNFQTHFMPF LNGAFKLKGK TGMASAVMPY
YTISYNQDKK YGENVGNSYN KYIINDLLRT KYKYDGVVCT DWLITANETA VDVFLTGKSW
GVEKLSVAER HYKILMNGVD QFGGNNEAKP VTDAYQMGVK EHGEAFMRAR FEQSAVRLLK
NIFRVGLFEN PYLDPQVSQK TVGTPEFMKA GYQAQLESVV MLKNKAKTLP LTKGKTVYIP
KRFTPAGRNF LGMQTPEKLD YPVNLAVIKK YFTVTDNPAE ADYALVFIQS PDSGGGYSSE
QAKAGGTGYV PVSLQYGDYT AQGTRDPSIA GGDPMEKFTN RTYTGKTAKT INSSDLTMVT
ETYAKMNGKP VIVALQVANP TVAKEFEAQS SAILAHFGVQ DQALLEIMTG AHEPSALLPM
QFPADMKTVE AQAEDVPRDM AAYKDSEGNT YDFGFGLNWK GVIQDARTAR YKKPVLSMK
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