| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1253 |
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| Symbol | |
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| ID | 8724986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1531461 |
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| End bp | 1533095 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | glycoside hydrolase family 28 |
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| Protein accession | YP_003386102 |
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| Protein GI | 284036172 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.80507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.501453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAG CAACCGGATT CGCTACGCTG TGCTTGGCCG CCATCGCCCA ATTTGTGTCG
GCCAGCCCGG CAGATCTTCC CAAAGTATCC GTCCCTACCT TTCGGAAGGA CACGATCGCG
ATCAGTAAGC TGGGCGCGGT GGCTGATGGC CTGACCCTGA ATACAGCCGC CATCAACAAA
GCTATTGACC AGTGTACTAA AGCCGGTGGA GGTGTTGTGT TAGTTCCACG TGGGTTATGG
CTGACGGGGC CTGTTACGTT GAAAAGTAAC GTAAACCTGC ATTTAGCCAA AGGCGCGTTG
CTTCAGTTTA CGAACCGGCG CGAGGTGTAT CCACTCATCA ATACGACCTG GGAGGGCGAA
GAAGCTATTC GAAATCAGGC CCCCATATCG GGGGTTGGGC TGGAAAATAT CGCCATTACG
GGCGAGGGTA TTCTGGATGG GGCCGGGGAA GCCTGGCGGA TGGTCAAGAA AGGTAAACTC
ACCTCCGACC AGTGGAAAAA ACTGGTTGCC TCTGGCGGTG TGCTGAATGA TAAACAGGAT
ACCTGGTACC CAACCGCGCA ATCGCTGAAA GGAGCCAGTG AACCGGTAAA AGCAGGACAG
CCAATGACGT ATTATGAGGG TATTAAGGAT TTCCTGCGTC CCAATATGTT GAGCCTGACC
CGCTGCAAAC GCATTTTGCT GGAGGGGGTT ACCTTCCAGA ATTCACCCGC CTGGTGTTTG
CACCCGCTTC TCTGTGAAGA CATTACCCTT CGCCGGGTTA CGGCTAAAAA CCCGTGGTAC
GCGCAGAACG GCGACGGTCT GGACCTGGAA TCCTGCCGAA ACGGGCTTGT CGACGATTGT
ACATTCGATG TGGGCGACGA TGGTATCTGT ATTAAATCGG GGCGCGATGA ACAGGGCCGC
AAACGGGGCG TTCCGACCGA AAACATCACC GTTCGGAACA GCCGGGTGTA CCATGCCCAC
GGTGGGTTTG TGATTGGCAG CGAAATGTCG GGCGGGGTAA AAAACCTGTA CGTGTCGAAC
TGTACGTTCA TGGGCACCGA TGTTGGTCTG CGATTTAAAA CGGCGCGGGG CCGGGGTGGC
GTGGTCGAAA ACATTTTCGT GGACGGCATC GACATGACCG ACATTGCCGG TGAAGCGATT
CTGTTCGACA TGTATTATGC CGCCAAAGAC CCGGTGCCTC AACAGGGCGA AAGCAATGAA
CTGCCCGTTA TTCAACCGCA ACCCCTCTCC GAAGCTACGC CCCAGTTCCG GTCGTTTCAG
ATTCGGAACG TGACCTGCAA AGGTGCCGAA ACCGCCATTC TGATCCGGGG CTTACCCGAA
ATGGCGGTAA AAGATATTCT GATTGAAAAT GCGGTGCTGC AAAGCCGGAA AGGACTGGTT
TGCATCGAAG CGGAAAATAT CCGGCTGAAA AACGTGTCGC TGCTCACCAC CAACAAAACG
GTTATGCAAG TGCAGAACAG CCGCGACATT ACGCTGGATA CCATTCACTT TACGGATAAA
GCTGACTTGC TGATGCACAT AGCAGGGGAA CGGTCCGGCA ATATCCGGCT TCTGAACACC
GACACTACGC ACGCGAAAAA AACGGTAGAA ACCGACGCGT CCGCCCCGGC CAATGCCCTC
ACTATGAAGA AATAA
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| Protein sequence | MKTATGFATL CLAAIAQFVS ASPADLPKVS VPTFRKDTIA ISKLGAVADG LTLNTAAINK
AIDQCTKAGG GVVLVPRGLW LTGPVTLKSN VNLHLAKGAL LQFTNRREVY PLINTTWEGE
EAIRNQAPIS GVGLENIAIT GEGILDGAGE AWRMVKKGKL TSDQWKKLVA SGGVLNDKQD
TWYPTAQSLK GASEPVKAGQ PMTYYEGIKD FLRPNMLSLT RCKRILLEGV TFQNSPAWCL
HPLLCEDITL RRVTAKNPWY AQNGDGLDLE SCRNGLVDDC TFDVGDDGIC IKSGRDEQGR
KRGVPTENIT VRNSRVYHAH GGFVIGSEMS GGVKNLYVSN CTFMGTDVGL RFKTARGRGG
VVENIFVDGI DMTDIAGEAI LFDMYYAAKD PVPQQGESNE LPVIQPQPLS EATPQFRSFQ
IRNVTCKGAE TAILIRGLPE MAVKDILIEN AVLQSRKGLV CIEAENIRLK NVSLLTTNKT
VMQVQNSRDI TLDTIHFTDK ADLLMHIAGE RSGNIRLLNT DTTHAKKTVE TDASAPANAL
TMKK
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