| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1249 |
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| Symbol | |
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| ID | 8724982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1524208 |
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| End bp | 1527063 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003386098 |
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| Protein GI | 284036168 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0242132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCG CCCGGCTCAA TACGTTGACC GTCTGGTTAA TAACGTCCTT CATAACGGTT
TCATTCACAA TATCGGAGGC AATCTCCGCC GATTTAACCC CCGTTAATTT ACGAACGGAG
TACAAACGAA ATCCGGTTGT CGATGTCGAT AAACCCCGCT TAAGCTGGGA ATTGACGGCT
ACCGGACGCG GGCAGATTCA AACGGCTTAT CAGATACTGG TCGCATCGTC GGCTGCGTTG
CTGAATGCCG AAAAAGCCGA CCTCTGGCAG AGCGCCAAAG TGGCGGGTAA TGCCACCAAT
CAGATTGAAT ATTCAGGTAA AACCCTCCTC TCCCGAACGG TTTGTTACTG GAAAGTTCGT
AGCTGGGACA AAAACGGCCA ACCCGGCCCC TGGAGCGCGG TGGCTACCTG GGAGATGGGC
CTGCTCACCA AAGCCGACTG GAAAGCTGAC TGGATTGGGA ACGACCTGAC CGCTTTGGGA
AAGGGCAAAA CCTATCACCT GCCGCCGTCG CCTTTTTTCC GAAAAGAAAT TCAACTGACA
GCCCCCGTCA AAAAAGCCCG ATTGTACGTA ACGTCACTGG GACTGTACGA ATATCAGATC
AACGGCAAAC GGATCGGGAA CGACTACTTT ACGCCCGGCT GGACCGATTA CAACAAGCGG
GTTTACTACC AGACCTACGA CGTGACGGCC GATGTAAAAC CCGGCAAAAA CGCGCTGGGG
GCCATCCTCG CCGATGGTTG GTATGCGGGC TATCTGGGTT ACGCGCTGCT CGTTGGAAAC
CCGGTCGTGA AAAATTTCTA CGGGAATGTG CCTCTCCTGA AAGCACAACT TGAGATCGAA
TACACCAACG GCAAAACCGA AACCATCGCC ACCGACCAAA GCTGGAAGAC CAGTCACGGC
CCTATCCTGG AAGCCGACAT CCTGAATGGT GAAACCTATA ACGCCAATCT GGCCTTCGAT
AACTGGAGCA AAACGGGTTT TAACGACGCG GGCTGGAAAA ACAGTACCAT TTTTCCGGAT
AAACCTGATA GGCAGCTTGA AGCGTATCCG GGAAATCCTG TTCGCGTTTT TCAGGAGTTG
AAAGCCAAAA CGGTTACACC CAAAGCGGGC GGGCATTACC TGTTCGACCT GGGGCAAAAC
TTTGCGGGTA TGGTGCGGCT CCGGGTAAAG GGCAACAAAG GTGATACCAT TCGTCTGCGC
TTCGGCGAAG TACTGTTTCC CAACGGTGAC ATCATGACCG AAAACCTGCG CAAAGCCCGC
GCTACGGACA CGTATATCCT CAAGGGTGAC CCGCAGGGCG AAACCTGGAC GCCTAAATTC
ACCTACCACG GCTTTCAATA CGTAGACGTA GCGGGTTTTA AATCAGCGCC CGGCCTGGAT
GCTATTACCG GAATCGTGTT AACCTCCGCA ACACCCGAAA CGGGCTCGTT CGAAACCGAC
AACAAGCTGA TTAACAAACT TTACCAGAAC ATCGTCTGGA CGCAGCGTTC CAACTATGTT
GAGGTACCCA CCGATTGTCC GCAGCGGGAT GAGCGGCTGG GCTGGACCGG CGATGCCCAG
GCCTACGTTC AATCGGCGAC GTTTAACAAC GACATTTCGG CTTTTTTCAC CAAATGGCTG
GTCGACCTCA ACGACGCCCA GCGACCCGAC AACGCCTACC CGATCTACGC CCCCGCGCCC
AACGTCCGCA AAACGGATAC CTACTCGCCT GGCTGGTCGG AGGCCGGGAT CATCTGCCCT
TACACGATCT ACAAAACCTA CGGCGATACC CGTGTGATTC AAAAATTCTG GCCGAATATG
GTGGCGTACC TGAAGTTTAT GGAAGCCAAG AGCCAGGGCA CTTACGTTTA CAAGGAAGGC
TCTTTTGCCG AAGTTTCTCC CAAAGGCGGG TTCGGTGACT GGCTCTCTGT CGGCAAGAAA
ACACCTCCCG ACATGCTGGC GACCCTGTAT TTTGGCTACG CAGCGTCCAT GATGGCCGAC
ATGGCAAAGG CCATTGGAAA GCCCGACGAA GCCACGTATT ACACCACCAT GTTTACAAAG
ATAAAACAGG CTTTTAGGGC TCATTACACC GATGAAACGG GCCGCTTTAA AACAAACAGT
GCCGCTTATG GCAATGGCGA AGGCTACGTC GATGGCGAAA TGGGGTTCGA AGGCCACACG
CAAACCGCTT ACGCCAATGC CATTTACATG AACATGATCG CCCCGGATTT AACCCCGAAA
GCGGGCAACT GGCTGGTCGA CCTGATCAAA GCAAACGACA ACAAACTCTC GACCGGATTT
CTGGGAGTGA AACCACTTTT GCCCTCGTTG TCCATGACCG GGCACAGCAA CGAAGCGTAC
AAACTTTTAC TGAGCACCGA GTACCCGTCC TGGGGTTTTG AGGTGGTGAA CGGAGCCAAT
ACCATCTGGG AGCGCTGGAA CAGCTACATC AAAGGAAAAG GATTCGAAAA CAACGCAGGC
ATGAACTCCT TTAACCACTA CGCATTCGGT TCCGTGAACG AGTGGCTGTT TGGTAATGCG
GCCGGGATAA AAGCAGCAGA AGCGGGCTAC CGAACGTTCA TCATCAGGCC CGAGCTGGCA
CCGCAAGGGA TCAACTTTGT GAACGCTAGT TATCGATCCA TCAACGGAAC GATAGTGTCG
TCCTGGAAAA AAGAGGGCAA TCGTGTTCGG ATGAAGGTCG TCGTTCCAGC GAATACCACC
GCTACTGTGT TCATCCCGAT TACTAAGCCG GACAGCGTTC TGGAAAGCAA TAAAGCCCTG
ACAGCCAGCC AGGACATTCG GGTGATTGGT GCCAGAGACG GATACCTACA AGTAACCGTT
GGTTCCGGAA CGTACCAGTT CAGCGCCGTA AATTAA
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| Protein sequence | MKFARLNTLT VWLITSFITV SFTISEAISA DLTPVNLRTE YKRNPVVDVD KPRLSWELTA
TGRGQIQTAY QILVASSAAL LNAEKADLWQ SAKVAGNATN QIEYSGKTLL SRTVCYWKVR
SWDKNGQPGP WSAVATWEMG LLTKADWKAD WIGNDLTALG KGKTYHLPPS PFFRKEIQLT
APVKKARLYV TSLGLYEYQI NGKRIGNDYF TPGWTDYNKR VYYQTYDVTA DVKPGKNALG
AILADGWYAG YLGYALLVGN PVVKNFYGNV PLLKAQLEIE YTNGKTETIA TDQSWKTSHG
PILEADILNG ETYNANLAFD NWSKTGFNDA GWKNSTIFPD KPDRQLEAYP GNPVRVFQEL
KAKTVTPKAG GHYLFDLGQN FAGMVRLRVK GNKGDTIRLR FGEVLFPNGD IMTENLRKAR
ATDTYILKGD PQGETWTPKF TYHGFQYVDV AGFKSAPGLD AITGIVLTSA TPETGSFETD
NKLINKLYQN IVWTQRSNYV EVPTDCPQRD ERLGWTGDAQ AYVQSATFNN DISAFFTKWL
VDLNDAQRPD NAYPIYAPAP NVRKTDTYSP GWSEAGIICP YTIYKTYGDT RVIQKFWPNM
VAYLKFMEAK SQGTYVYKEG SFAEVSPKGG FGDWLSVGKK TPPDMLATLY FGYAASMMAD
MAKAIGKPDE ATYYTTMFTK IKQAFRAHYT DETGRFKTNS AAYGNGEGYV DGEMGFEGHT
QTAYANAIYM NMIAPDLTPK AGNWLVDLIK ANDNKLSTGF LGVKPLLPSL SMTGHSNEAY
KLLLSTEYPS WGFEVVNGAN TIWERWNSYI KGKGFENNAG MNSFNHYAFG SVNEWLFGNA
AGIKAAEAGY RTFIIRPELA PQGINFVNAS YRSINGTIVS SWKKEGNRVR MKVVVPANTT
ATVFIPITKP DSVLESNKAL TASQDIRVIG ARDGYLQVTV GSGTYQFSAV N
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