Gene Slin_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1243 
Symbol 
ID8724976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1516775 
End bp1517776 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content55% 
IMG OID 
ProductInositol phosphatase/fructose-16-bisphosphatase 
Protein accessionYP_003386092 
Protein GI284036162 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0340688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0302273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA CCGCTTCTCA CCCATTGGCA TTACCCGTTG GTGTAACCCT CGACCGGTAC 
ATCATGCACC GGCAAACCGC TTTCCCCTAT GCCACCGGCG AACTATCGCA GTTACTGCGC
GACATTGCAC TGGCCGGAAA AATCATTCAC CGGGAGGTAA ACCGGGCCGG TCTCATTGAC
CTGACAGGGG GTATGGGCGT CCAGAACGTT CAGGGAGAGA GTCAACAGAA GCTGGACATG
ATTGCCAATA TCCGCTTTAG CCGGGCGCTC AAAAACGGGG GTGAAGCCTG CGCCATTATC
TCGGAAGAGG ACGAAGACAT TATCTTCACC GGCAACAACA ACGGCAAATA TGTGGTCGCG
ATTGACCCGC TGGATGGCTC GTCGAACATT GACGTCAACG TATCCATTGG CACTATCTTT
TCCATTTATC GACGCGTAAC AGCCATTGGT ACGGAGCCCT CGCTGGCCGA TTTTCTACAG
GGAGGCCGTC GGCAGGTGGC TGCGGGCTAC ATTTTGTACG GCTCATCGAC CATCATGGTG
TATACGACCG GGCACAGTGC CAACGGGTTT ACCTACGATG CCTCACTCGG CGAGTTCATC
CTGTCGCACC CCGACATTCA TAGCCCCGCC GATGGGCAAA CGTACTCCTG CAACGATGGC
AACCTGGATA GCTACGAAGC AGGTGTTCGG GAGTACCTAA CGATCTGTCG TCAGAAAGAA
TATACCGCCC GCTACATCGG CTCGCTGGTA GCCGATTTTC ACCGTAACCT GCTCAAAGGG
GGCATTTACC TGTACCCACC CACCAAAAAG TCGCCAACGG GTAAACTGCG TTTGCTCTAC
GAAGCCTTTC CGCTCGCGTT TCTGGCCGAA AAAGCCGGTT GTCTGGCCAC ATCGGGGCAT
CAGGCCATTC TGGATATTAA ACCGACGAGT CTACACCAGC GTACTCCGCT GTTCATTGGT
GCCCCTGTTA TGGTCGAGAA CCTGATGGGT CATCTGGGAT AG
 
Protein sequence
MEITASHPLA LPVGVTLDRY IMHRQTAFPY ATGELSQLLR DIALAGKIIH REVNRAGLID 
LTGGMGVQNV QGESQQKLDM IANIRFSRAL KNGGEACAII SEEDEDIIFT GNNNGKYVVA
IDPLDGSSNI DVNVSIGTIF SIYRRVTAIG TEPSLADFLQ GGRRQVAAGY ILYGSSTIMV
YTTGHSANGF TYDASLGEFI LSHPDIHSPA DGQTYSCNDG NLDSYEAGVR EYLTICRQKE
YTARYIGSLV ADFHRNLLKG GIYLYPPTKK SPTGKLRLLY EAFPLAFLAE KAGCLATSGH
QAILDIKPTS LHQRTPLFIG APVMVENLMG HLG