| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1240 |
|---|
| Symbol | |
|---|
| ID | 8724973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1514011 |
|---|
| End bp | 1514712 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003386089 |
|---|
| Protein GI | 284036159 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.538948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.136467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCATT ACACGCATCC AAACAGAATA CTTGTTGCTT TAGACTGTAT TATATTCGGG
TTTGATGGCG AAGAACTTAA ACTACTGTTA ATCAAGCGAA ATTTCGAGCC GGAGCGGGGC
AAATGGTCAT TGATGGGCGG TTTTTTGAAG GAAGATGAAG ACCTTGAATC GGCAGCACAA
CGCATTTTGT TCGACCTGAC GGGCATCACA AATACCTACC TGGAGCAATT GCAGACCTTT
GGGGCCGTCA ACCGCGACCC CGTAGAGCGA ACGATCTCGG TCGTTTATTA TGCGCTGGTC
AATATTCAGG ATCAGGATTT GAACGCCATT CGATCCCATA ATGCCTCCTG GATTGGTCTC
AATGAGAAAC CAAACCTGAT TTTCGACCAC AATACGATGG TTGAACAGGC CCTTCACCGA
CTACGGTACA AAGCAGCACT TCACGCCATT GGCTTTGAAT TGATGCCGGA GAAATTTACC
ATTCCCCAGC TTCAGAAAGT GTATGAAGCC ATTTATACCA AACAGCTCGA CCGGCGCAAT
TTCAGTCGCA AGATCCTGTC TACCGATCTG CTCATTGGCA CCGGCGAAAA AGACACGGCT
TCGGTCACCA AAAAAGGGCA GCTATACCGG CTCAATGCGG AAAAGTACCA GCAATACCTC
ACCGACTACG TGAGTTTCTT CCCGGAGTTG ACGCTGGCAT AG
|
|---|
| Protein sequence | MIHYTHPNRI LVALDCIIFG FDGEELKLLL IKRNFEPERG KWSLMGGFLK EDEDLESAAQ
RILFDLTGIT NTYLEQLQTF GAVNRDPVER TISVVYYALV NIQDQDLNAI RSHNASWIGL
NEKPNLIFDH NTMVEQALHR LRYKAALHAI GFELMPEKFT IPQLQKVYEA IYTKQLDRRN
FSRKILSTDL LIGTGEKDTA SVTKKGQLYR LNAEKYQQYL TDYVSFFPEL TLA
|
|---|
| |