Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1233 |
Symbol | |
ID | 8724966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1504535 |
End bp | 1505650 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | alanine racemase domain protein |
Protein accession | YP_003386082 |
Protein GI | 284036152 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.20919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAAA CACCCTGGTA TTCGATTGCC GACATTGCCC GACTCGATAC GCCCGCCCTG GTGATTTATC CCGAACGGGT AAGACAGAAT ATTGCCTCGC TGGTTCGATC TATTGACAGC GTAGATCGGT TGCGTCCGCA CGTCAAAACC AGTAAGTCGC GGGAGGCTTC GCAGTTGCTG ATGGATGCCG GTATTCGCAA GTTAAAATGC GCCACCATTG CCGAAGCCGA AATGCTGGCG TCGATCGGGG CGCCTGATGT ACTGCTGGCC TATCAGCCAA ACGAAGCCAA GATGCACCGG CTGCTGAGCC TGATAAAAGC GTATCCCGAA ACGATATTTT CCTGTCTGGT CGATAACGTG ACCACTGCCC ACCAGCTTTC AGAACTGGCC GTGGGAGCCG GGGTCGTCGT GCCTGTTTAT ATCGACTTAA ATGTGGGTAT GAACCGCACG GGCATGGTAC CCGGCGAGGC CGTACTGACT CTGTACACCG AATTGTCGTC CTTGCCGGGT ATCCGGCCAA TGGGACTTCA TGCGTACGAT GGACACCTTC GCGACCCGGA TCTGGCCGTT CGGACGGCTC AGTGCGACAC CGCTTTCTGG CCCGTCAAAC TGCTGAGCGA TACGATTGCA GCTCGTGGGC TCGGCAAACC CATTCTTGTG GTAGGCGGAA GCCCGACGTT CCCGATCCAC GCCAAAAGGC CCGATGTGGA GTGCAGCCCC GGCACGTTTA TCTACTGGGA CAAAGGGTAT CAGTCTACGC TGGCTGAGCA GCCGTTTTTA CCGGCGGGTA TGGTCGTGAC GAGGGTTATT TCCCTGCCCG ACGCCACCAA AGTCTGTCTG GACGTTGGCC ATAAATCCAT TGCTGCCGAA GGCGAATTAA GCCAGCGGAT CACCTTTCTG AATGCCCCCG AACTGAATGC CATTGGGCAG AGTGAGGAGC ATCTGGTTGT GGAAGCGGGT GAAGGCCATT CCTATAAAGT AGGGGATGTG CTCTACGGCC TGCCCCACCA CATTTGCCCA ACCGTTGCCC TCTACGAGCG AGCTTACACG GTTGAGAACG GAGCCCTTTC GGGCGAGTGG CGTACCGTCT CCCGCGACCG GGTGATATCA ATATAG
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Protein sequence | MEQTPWYSIA DIARLDTPAL VIYPERVRQN IASLVRSIDS VDRLRPHVKT SKSREASQLL MDAGIRKLKC ATIAEAEMLA SIGAPDVLLA YQPNEAKMHR LLSLIKAYPE TIFSCLVDNV TTAHQLSELA VGAGVVVPVY IDLNVGMNRT GMVPGEAVLT LYTELSSLPG IRPMGLHAYD GHLRDPDLAV RTAQCDTAFW PVKLLSDTIA ARGLGKPILV VGGSPTFPIH AKRPDVECSP GTFIYWDKGY QSTLAEQPFL PAGMVVTRVI SLPDATKVCL DVGHKSIAAE GELSQRITFL NAPELNAIGQ SEEHLVVEAG EGHSYKVGDV LYGLPHHICP TVALYERAYT VENGALSGEW RTVSRDRVIS I
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