Gene Slin_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1233 
Symbol 
ID8724966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1504535 
End bp1505650 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content57% 
IMG OID 
Productalanine racemase domain protein 
Protein accessionYP_003386082 
Protein GI284036152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.20919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAA CACCCTGGTA TTCGATTGCC GACATTGCCC GACTCGATAC GCCCGCCCTG 
GTGATTTATC CCGAACGGGT AAGACAGAAT ATTGCCTCGC TGGTTCGATC TATTGACAGC
GTAGATCGGT TGCGTCCGCA CGTCAAAACC AGTAAGTCGC GGGAGGCTTC GCAGTTGCTG
ATGGATGCCG GTATTCGCAA GTTAAAATGC GCCACCATTG CCGAAGCCGA AATGCTGGCG
TCGATCGGGG CGCCTGATGT ACTGCTGGCC TATCAGCCAA ACGAAGCCAA GATGCACCGG
CTGCTGAGCC TGATAAAAGC GTATCCCGAA ACGATATTTT CCTGTCTGGT CGATAACGTG
ACCACTGCCC ACCAGCTTTC AGAACTGGCC GTGGGAGCCG GGGTCGTCGT GCCTGTTTAT
ATCGACTTAA ATGTGGGTAT GAACCGCACG GGCATGGTAC CCGGCGAGGC CGTACTGACT
CTGTACACCG AATTGTCGTC CTTGCCGGGT ATCCGGCCAA TGGGACTTCA TGCGTACGAT
GGACACCTTC GCGACCCGGA TCTGGCCGTT CGGACGGCTC AGTGCGACAC CGCTTTCTGG
CCCGTCAAAC TGCTGAGCGA TACGATTGCA GCTCGTGGGC TCGGCAAACC CATTCTTGTG
GTAGGCGGAA GCCCGACGTT CCCGATCCAC GCCAAAAGGC CCGATGTGGA GTGCAGCCCC
GGCACGTTTA TCTACTGGGA CAAAGGGTAT CAGTCTACGC TGGCTGAGCA GCCGTTTTTA
CCGGCGGGTA TGGTCGTGAC GAGGGTTATT TCCCTGCCCG ACGCCACCAA AGTCTGTCTG
GACGTTGGCC ATAAATCCAT TGCTGCCGAA GGCGAATTAA GCCAGCGGAT CACCTTTCTG
AATGCCCCCG AACTGAATGC CATTGGGCAG AGTGAGGAGC ATCTGGTTGT GGAAGCGGGT
GAAGGCCATT CCTATAAAGT AGGGGATGTG CTCTACGGCC TGCCCCACCA CATTTGCCCA
ACCGTTGCCC TCTACGAGCG AGCTTACACG GTTGAGAACG GAGCCCTTTC GGGCGAGTGG
CGTACCGTCT CCCGCGACCG GGTGATATCA ATATAG
 
Protein sequence
MEQTPWYSIA DIARLDTPAL VIYPERVRQN IASLVRSIDS VDRLRPHVKT SKSREASQLL 
MDAGIRKLKC ATIAEAEMLA SIGAPDVLLA YQPNEAKMHR LLSLIKAYPE TIFSCLVDNV
TTAHQLSELA VGAGVVVPVY IDLNVGMNRT GMVPGEAVLT LYTELSSLPG IRPMGLHAYD
GHLRDPDLAV RTAQCDTAFW PVKLLSDTIA ARGLGKPILV VGGSPTFPIH AKRPDVECSP
GTFIYWDKGY QSTLAEQPFL PAGMVVTRVI SLPDATKVCL DVGHKSIAAE GELSQRITFL
NAPELNAIGQ SEEHLVVEAG EGHSYKVGDV LYGLPHHICP TVALYERAYT VENGALSGEW
RTVSRDRVIS I