| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1231 |
|---|
| Symbol | |
|---|
| ID | 8724964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1503034 |
|---|
| End bp | 1503876 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | Lysophospholipase L1 and related esterase-like protein |
|---|
| Protein accession | YP_003386080 |
|---|
| Protein GI | 284036150 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0882392 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGAC GTTTTAAAAA GTATATCACC CGGCAACACC TACTTATGAA ACCAGCACCG
GCCGTTACAC TATTACTTGT TAGCGCTTGT CTCTGGATTG CTGCCATCAT TCCACAGAAA
CCAACGCTGT ACCTGATCGG CGATTCGACC GTAAAAAACT CCAATGATAA AGGTGAGGGC
GGCATGTGGG GCTGGGGTCA TTTTATCGAC GCTTATTTCG ATACAACCCG GATTAACATC
GAGAACCATG CCATCGGAGG TCGAAGCAGC CGGACCTTCC TGACCGAAGG TCGCTGGGAG
AAAATCCGGA CAACGCTCAA ACCCGGCGAT TTTGTGATGA TGCAGTTTGG CCACAACGAC
GCCAGCCCCA TCAATGATAC GCTGCGGGCG AGAGGAACGA TAAAAGGCAT TGGCGAAGAA
ACCCAGGAGA TTGACAACCT GATCACTAAA AAACACGAGG TAGTGCACAG TTACGGCTGG
TACCTGCGAA AGTACGTGAC CGAAACCAAA GCCCGAGGGG CCATACCCAT CGTTCTGTCG
CTGGTGCCGC GTAACGGCTG GAGAGATGGC AAAGTCGTTC GGGGAGCTGA TAATTACGGC
AAATGGGCAT CTGAAGTGGC AAAGTCAGAA ACCGACGGTA AACTAAAAAC CTATTTCATT
GACCTCAACG AAATCGTTGC CCGCAAATAC GATGTCGTGG GCGACTCAGC CCTGTTACAG
GCTACCTATT TTGTGAAAGA TAATGTCCAC ACCAATGCCG CCGGGGCAAA ATTAAACGCA
GCCGCTGTGG TAGACGGCCT TAAGCAACTG AAATCCTGCC CGCTCAACCT CTACGTGAAG
TAA
|
|---|
| Protein sequence | MFRRFKKYIT RQHLLMKPAP AVTLLLVSAC LWIAAIIPQK PTLYLIGDST VKNSNDKGEG
GMWGWGHFID AYFDTTRINI ENHAIGGRSS RTFLTEGRWE KIRTTLKPGD FVMMQFGHND
ASPINDTLRA RGTIKGIGEE TQEIDNLITK KHEVVHSYGW YLRKYVTETK ARGAIPIVLS
LVPRNGWRDG KVVRGADNYG KWASEVAKSE TDGKLKTYFI DLNEIVARKY DVVGDSALLQ
ATYFVKDNVH TNAAGAKLNA AAVVDGLKQL KSCPLNLYVK
|
|---|
| |