Gene Slin_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1230 
Symbol 
ID8724963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1501588 
End bp1502886 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content50% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003386079 
Protein GI284036149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.109044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAC GATCTTCTAA TAATCCGCAA CCCCTGGCCG AATTAGTCTC GTACTTTTTC 
ACCCGCCGGG AAGCTATCCT GAATAACTGG CGCATCACCT GCGAAAACGA CGCGTTCCTG
GGCAAGATAT CAACCTTGAG CCGGGACGAG TTCAACAACC TGATTCCAAT CGTTTTAACT
CTTCTCGAAA AACGTCTGAT GAAGGAACCG GAAGACGTTG ATCCGGCCAT CGCAGCAACC
TCGCACGGAT TACACCGCTG GCAAAAATCG CATGCGCTGC TGGAAACGAT TCGGGAGTTG
AACCACTTTA CGCAGATACT TTACAATGAG CTGGAAGCCT TTCATGCCCT TTTCCCAAAA
ACGGAAGCCC GCTTTCTTCT CCAGGTACAC CGCCTGATTG CTCAGTTCAT GAGTGAAACT
ATTGATGGCA GTGTTAAAAA ATACGATGAA TTGCAACGGC TGGAAGCCGC TAACCGTGCT
TCTTCGTTAC AAAAGGTGAT CGATCAGATG ACCGAGCTAT CTCAGCTGCG CGGTACCATG
CTCCGTACCA CGTCGCATGA CCTGCGGGGT AGCTTTGGAA TTATAAATAG TGCCGCTCAC
CTCCTTAAAA TGGACGGGCT AAGCCAGGAA GAACGCGATC AATTCCTGGA GATGCTGAAC
CGAAACCTGA CCAACGTGCA GTCCATGCTG GGAAACCTCA CGAATCTATC GCGACTGGAA
GCCGGTGAAG ACATGTTGCA GATTCAAACG ATTGACGTTG TCGGATTGGT AAAAAAACTT
ATTGACGATG CATTGCCCCT GGCCAGCGAG CGTGGTCTGG TACTCTCTGC CGACGGACCG
GAATCAATCA TAGCGCAAAC AGATCCCGGT AAGCTTCACC AGATTGCTTA TCATCTTCTT
CAGAATGCCC TCCAATACAC CTCGTCGGGG TTCATATCCG TATCCTGGAT AACAGAAAAT
GATTTTCACT GGATTTTAAG CATTCAGGAT TCAGGAGCGG GCATAAGCGG CAATCTGGCA
GGTTTGTTAA CGAAACAGCT GAAACCCAAT GTGGAGCCTG TCAGCGTGCT GTCGCCGGAT
CAGAGCGACC CGGTTTCGGT TCTCCCCACA AATGAGCATG ACATACCGGA GGGGTCCGTT
CTGGCGCAGA CAGCCGTTAA TTCAACCCAT CGGGAAGGAG TTAGCCTTCA GCTTGTTAAG
CGGTTATGTG AACTGCTGGA CGCCAGTCTG GAAATTGAAA CAGAGGAAGG GCGGGGTAGT
TTATTCCGCA TCCGTTTTCC TGTTCATTAT AATAACTAG
 
Protein sequence
MTTRSSNNPQ PLAELVSYFF TRREAILNNW RITCENDAFL GKISTLSRDE FNNLIPIVLT 
LLEKRLMKEP EDVDPAIAAT SHGLHRWQKS HALLETIREL NHFTQILYNE LEAFHALFPK
TEARFLLQVH RLIAQFMSET IDGSVKKYDE LQRLEAANRA SSLQKVIDQM TELSQLRGTM
LRTTSHDLRG SFGIINSAAH LLKMDGLSQE ERDQFLEMLN RNLTNVQSML GNLTNLSRLE
AGEDMLQIQT IDVVGLVKKL IDDALPLASE RGLVLSADGP ESIIAQTDPG KLHQIAYHLL
QNALQYTSSG FISVSWITEN DFHWILSIQD SGAGISGNLA GLLTKQLKPN VEPVSVLSPD
QSDPVSVLPT NEHDIPEGSV LAQTAVNSTH REGVSLQLVK RLCELLDASL EIETEEGRGS
LFRIRFPVHY NN