| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1224 |
|---|
| Symbol | |
|---|
| ID | 8724957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1490816 |
|---|
| End bp | 1493455 |
|---|
| Gene Length | 2640 bp |
|---|
| Protein Length | 879 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003386073 |
|---|
| Protein GI | 284036143 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0550391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.309414 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTACT CTTTCCCGGC GGCCTTACTT CTTCTTTTGG GGCTGCATCT TAGCCCGGTA
GTCTGCGCTC AACAGCAGCA AGTCGCACCA AAGCAGCAGG CAATGGGCCA TACTGCCCGC
CCCTGGACGT ACTGGTGGTG GATGGGTAAT GCAGTCAACG AAGCAGACAT CACCCACCAG
CTCGAACAGT TTGCCAAAGC CGGGCTGGGG GGCGTCCATA TCATCCCGAT TTATGGGGTT
AAAGGCTACG AAACCAAATT CATTCCCTAC CTGTCTGACA GATGGCTGGC CGTTTTTGGG
CATACCGTTC GTGAAGGCAA CCGGCTCGGG CTGGGCGTTG ACCTGACCAC CGGCACCGGC
TGGCCCTTTG GCGGGCCGGG CGTATCAACG GCGATGGCGG CTAAAGAATG GAAACTAGTT
GACGGTAAAC TGACGGCCGT TCCAACCAAA CAACAGGTCA AACGCCCCGC ACCGGGCGCA
CAGGGTCCCG TTATTGATTA TTTCAGCAAA CAAGCGGTGG AACGGTATCT CCACCGGTTC
GATTCAACGC TGGCGCATTC GCCCCAGCAG CCCCGCGCCG TCTACAATGA CTCCTACGAA
GTGTATGGCG CGAACTGGAC AGATAATTTC CTAACCGAAT TTAAAGCCCG GCGAGGCTAT
GATCTCCAAA GCCAGTTAAC TGCTTTTCTG GATACGAATC AGACTGAAAC CAGCATTCTC
GTTCATCAGG ATTACCACCA AACGTTGTCT GAGCTGTTGC TCGACGGCTT TGCGAAACCC
TGGGACAACT GGGCGCATAA GTCGGGCTAC CGTACTCGCA ACCAGGCGCA TGGCTCGCCC
GGTAACCTGA TCGACCTTTA CGCTGCCACC GACATTCCCG AAACCGAGTC GTTCGGCTCC
AGCCGGTTTA CTATTCCGGG TCTGCGCGTC GATGCCAACT ATGAAGTAGA CCGCTTTGGC
ACGCCTAATC CGCTCGCTAT GAAGTTCGCT TCGTCGGCGG CTCACCTGAT GGGCAAACTG
CTGGTAAGTT CGGAAACCGG CACCTGGCTA GCTAACCATT TTCAGGTGTC GCTATCGCAG
GTAAAGCCGC AGGTCGATGA GTTACTGGCG TCGGGGATCA ACCATATTTT TTACCACGGT
ATCCCCTACT CGCCCCCGGC TGAACGCTGG CCAGGCTGGT CGTTTTATGC GTCAACAAAC
TACGGTCCAA GTTCCCATTT CTGGCCGCAT CTACCGCTGC TGAATCAGTA CATCGAACGC
TGTCAGGCGC GGTTACAGCG CAGCAAACCC GACAACGACG TGCTGGTTTA TTTCCCCATC
CACGATCTCT GGGCAACCCG GGCGAAATCA GCGGGCGGGA TTCATCAGTT GGAGGTTCAC
CATGTGGAGC GTTGGCTGTT GCCGCAACCA TTCGGGCGTT TGTGCGAGCA GTTGTCGGAG
CGCGGGTATG CGTTCGACTT CATTTCCGAC GAATTGCTCA AGAGCCTAAC CGTAACCAAA
CAGGGCATTC GGGCGGCAAG CGGGGCTACG TATCAGGTCA TTGTGGTTCC GAAAACCACC
TATATTCCCA CTACTACACT TCGGTTATTA GACAAACTGG CTCAGCAAGG CGCCAGAATC
GTTTTCGACG GGCAGCTGCC TCAGCAGGCG GCTGGCTTTT ATGACCACAA GGCGCAAACA
GCAACCGTAC AGCAGCTTGG CCAAACGCTT CAGAAACGGC CAACTGTCAC GGTCAGTGCC
AACCTGTTCG AAACTCTGAA CAAATCGGGC GTTCGCTCGG AAACCTGGGC GGCAGAGGGG
TTGTCGTTCA TTCGTAAACG GCAAGGTTCG GGCATGTCGA AATCCGGCCT TTCGGCAGAT
ACCACGCAGT ATTTTATCAC GAATCTTGGC AACCGGTTTA AGCAGGGCTG GATTACCCTT
TCAGCAACGG GCCTCGTTAG TCAGTATAAC CCGTTAACAA ATCTGACGAC GGCATTACCC
GTTCGAAAAG GGAAGAATGG CCACAACGAT GTGTATCTAT CTCTTGAATC AGGGCAATCG
TGTTTTATCA ATGTCCGTCC GGGAACGCCC GTTTTTACCG ATGCAGCAGC ACTACAGCGG
GTTATAAACC CCACTGGAAC ATCTATTGTG CTGAAAAAAC CCTGGCACAT TCAGTTTATC
AAGCGAAATC CGGAACAGGG TCAGCCGGCG CTTAGGCTAT CGGTTACACT ACCCACTCTT
ACCGACTGGA CAACACTTTC CGACTCGGCC GGGTACTTCT CCGGAACGGC ACGCTACACC
ACAACGGTCA ACATCCCCGC TGGCGCTGCG ACCTCCGCTT ACCTTCTCGA CCTCGGCGAT
GTTCGGGAAT TGGCGGAGGT GCGACTGAAC GGCCAGCCAT TGGGAACGGC CTGGTGCATC
CCGTTTCAGC TAACGATACC CGCTAACCGC CTGAAAACGG GTGAGAATCA ACTGGAAATC
GACGTAACCA ACCTATCGGC CAACTACATG CGGCTTTACG ACCGGCTAAA CCCCGGCTGG
AAGAAGTTTT ACGACATCAA CATCGTCGAT ATTCGGTATA AGCCTTTTGA TGCTACACGC
TGGGCGGCTG TACCCTCCGG CTTGCTCGGC CCGGTCATCT TAACCCCATC CAGCTTATGA
|
|---|
| Protein sequence | MKYSFPAALL LLLGLHLSPV VCAQQQQVAP KQQAMGHTAR PWTYWWWMGN AVNEADITHQ
LEQFAKAGLG GVHIIPIYGV KGYETKFIPY LSDRWLAVFG HTVREGNRLG LGVDLTTGTG
WPFGGPGVST AMAAKEWKLV DGKLTAVPTK QQVKRPAPGA QGPVIDYFSK QAVERYLHRF
DSTLAHSPQQ PRAVYNDSYE VYGANWTDNF LTEFKARRGY DLQSQLTAFL DTNQTETSIL
VHQDYHQTLS ELLLDGFAKP WDNWAHKSGY RTRNQAHGSP GNLIDLYAAT DIPETESFGS
SRFTIPGLRV DANYEVDRFG TPNPLAMKFA SSAAHLMGKL LVSSETGTWL ANHFQVSLSQ
VKPQVDELLA SGINHIFYHG IPYSPPAERW PGWSFYASTN YGPSSHFWPH LPLLNQYIER
CQARLQRSKP DNDVLVYFPI HDLWATRAKS AGGIHQLEVH HVERWLLPQP FGRLCEQLSE
RGYAFDFISD ELLKSLTVTK QGIRAASGAT YQVIVVPKTT YIPTTTLRLL DKLAQQGARI
VFDGQLPQQA AGFYDHKAQT ATVQQLGQTL QKRPTVTVSA NLFETLNKSG VRSETWAAEG
LSFIRKRQGS GMSKSGLSAD TTQYFITNLG NRFKQGWITL SATGLVSQYN PLTNLTTALP
VRKGKNGHND VYLSLESGQS CFINVRPGTP VFTDAAALQR VINPTGTSIV LKKPWHIQFI
KRNPEQGQPA LRLSVTLPTL TDWTTLSDSA GYFSGTARYT TTVNIPAGAA TSAYLLDLGD
VRELAEVRLN GQPLGTAWCI PFQLTIPANR LKTGENQLEI DVTNLSANYM RLYDRLNPGW
KKFYDINIVD IRYKPFDATR WAAVPSGLLG PVILTPSSL
|
|---|
| |