| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1203 |
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| Symbol | |
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| ID | 8724936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1463367 |
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| End bp | 1464860 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003386053 |
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| Protein GI | 284036123 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTGG CGTGGAAACA GATGCGGGTT GTAGTAGCCC TATTAGTAAC GGCAAATTTG
TCGGCAACAT ACGCACAGAG TACGGGCTCG GCCGTATCGC CGGGCACCGG AGCCGTTGCA
CCAGCCCGGG TAAACTTACA GCAATGTATT GAGATCGCCC AGCAGAACAA TATTCAGATT
CGGCAGGGGC GGTTAACGAT TGCCAACAGC GAGCTGCAAC TGCATCAGGC GCGGCTAAAC
CAATTGCCAA CTGCCGTTTT TCAAGGTAAC CAATCGTTAA ATGGGGGGCG TAGTATTAAC
CCTCAATCCA ACGAATTCGT CCAGCAAACG ATTAACTCCA GTAGTTTTCA GCTCAACTCA
TCAGCGACGC TTTACAACGG TGGTGTGTTG CGCAGCACGG TCAGGCAAAA CGAATTGGCA
CTTCAGGCGG GTCAGCAGGA GTTAAATGCC ACCCAAAATA ATGTCTCGCT AACGGTTGCT
CAAAACTACC TGAACGTGCT GACGGGCACG GAACAATTGG CGGTGGCGCA ACGCCAGGCC
GATGTAACGC GGGCGCAGCT CGAACGTACG CAACGACTGG TCAACGCAGG TTCTGCTCCG
GAAGCCAATC TATTTGAACT TCGGGCTACC TTAGCCAGCA ACGAACTGGA GATCATAAAT
GCTCAGAATA CGCTTGATCT GGCCAAAGTT GCTTTGTTGC AAGCCATGAA TGTGCCAATC
AATCAGGATT TTGAGGTCGA ACCAATTACC GTTCCCGATC CTGGTCTAGA CCCTTACACA
GCGTCTGTAC AGCAACTTTA TGATGTGGCT TCTGCAAACC TGCCAGAAAT TAAAGGCGCA
GATTTGCGGG TTAAAAGTGC CAATTTAGGG GTACAGGTTG CCAAAGGCGG ATTGTATCCG
ACGCTATCAT TAAACGGTAA CCTGAGTACT GTTTATTCCA GCGCAGCTAA AACGGCCGTT
CCCAATGGAC AATCAACGCA GCAAACGATT GGTTTTGTTA CTGATCCCGT TACCGGAACC
CAGATACCCA TTAATACCTC AGTACCGGGT TATGACCGCA CTGGTATCTC TTATGGCACG
CAGTTAAGTA ATAACTTTAG CCAGTCTGTT TCACTTTTTC TGCGGGTTCC GATTTTTCAG
GGCAACTTAT CGCGGAACCG GATTACTACG GCTAAAATCC AACAGCAAAA CGCTGAGTTA
ACCGCCCTGA ACACCCGTCT AACACTACGT CAGCAGATTG AAACGGCGTA TACGCAGGTG
AAAGCCGGAG CGAATCGGTA CCGGGCGACG CAAGCACAGG TTGCCTCGCT GGAGAAGGCG
TTTCAGGTCG CAGAGAGTCG GTTAAATGCC GGTGCCATTA ATGCAACGGA TTACAGCATT
GCCAAAACGA ACCTCGACCG GGCTCGTGCC AGCCTGGTAC AGGCGAAATA CGATTACGTG
TTCCGGACAA AAATTTTGGA TTACTATCAA AATAAACCGC TTAGTTTTAA TTAA
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| Protein sequence | MQVAWKQMRV VVALLVTANL SATYAQSTGS AVSPGTGAVA PARVNLQQCI EIAQQNNIQI
RQGRLTIANS ELQLHQARLN QLPTAVFQGN QSLNGGRSIN PQSNEFVQQT INSSSFQLNS
SATLYNGGVL RSTVRQNELA LQAGQQELNA TQNNVSLTVA QNYLNVLTGT EQLAVAQRQA
DVTRAQLERT QRLVNAGSAP EANLFELRAT LASNELEIIN AQNTLDLAKV ALLQAMNVPI
NQDFEVEPIT VPDPGLDPYT ASVQQLYDVA SANLPEIKGA DLRVKSANLG VQVAKGGLYP
TLSLNGNLST VYSSAAKTAV PNGQSTQQTI GFVTDPVTGT QIPINTSVPG YDRTGISYGT
QLSNNFSQSV SLFLRVPIFQ GNLSRNRITT AKIQQQNAEL TALNTRLTLR QQIETAYTQV
KAGANRYRAT QAQVASLEKA FQVAESRLNA GAINATDYSI AKTNLDRARA SLVQAKYDYV
FRTKILDYYQ NKPLSFN
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