Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1201 |
Symbol | |
ID | 8724934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1461789 |
End bp | 1462475 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003386051 |
Protein GI | 284036121 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCAAC TTAACAACGT CTCTAAGTAC TACCCTGCGG GCTTCGGTCG GGTGTATGTG CTACGCAATA TCAGCCTGGA AATAGCCCAG GGGGAGTTTG TATCCATCAT GGGGCCATCG GGTTCGGGTA AGTCAACATT GCTGCATATT CTGGGCCTAC TGGAAGAACC TTCCGAAGGC GAGTATCTGC TCGACGATCA GCCGGTACAA AAGCTTTCCG AGAAAAAACG CACGGAACTG CACCGGACAC AGATTGGCTT CGTCTTTCAG GCATACCACC TGATTGATGA ACTAACCGTG TATGAAAACA TCGAAACACC CCTGCTGTAC AAAGGGCTAA GTGGATCGGA GCGGAAAAGC CGCGTGGCCG AATTGCTTGA CCGGTTCAAT ATTGTTGCCC GGAAAGATTT GTTTCCATCG CAGTTATCGG GCGGGCAGCA GCAGTTGGTG GGTATTGCCC GTGCGCTGGC CACAGAGCCA GGGGTTATCT TTGCTGATGA ACCAACCGGC AATCTGCACT CCGATCAGGC CCGTGATATT ATGGAGCTAT TCCGTGAACT GAACCAGAAA GACGGCGTAA CCATCGTTCA GGTAACGCAC TCGGAAGTGA ATGCCGAATA CGGGTCGCGG GTGATCCGGC TGAAAGATGG CTGGTTGGAG CCTTCAGATG TGAAGCTGGT TCAATAA
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Protein sequence | MIQLNNVSKY YPAGFGRVYV LRNISLEIAQ GEFVSIMGPS GSGKSTLLHI LGLLEEPSEG EYLLDDQPVQ KLSEKKRTEL HRTQIGFVFQ AYHLIDELTV YENIETPLLY KGLSGSERKS RVAELLDRFN IVARKDLFPS QLSGGQQQLV GIARALATEP GVIFADEPTG NLHSDQARDI MELFRELNQK DGVTIVQVTH SEVNAEYGSR VIRLKDGWLE PSDVKLVQ
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