Gene Slin_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1201 
Symbol 
ID8724934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1461789 
End bp1462475 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content52% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003386051 
Protein GI284036121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAAC TTAACAACGT CTCTAAGTAC TACCCTGCGG GCTTCGGTCG GGTGTATGTG 
CTACGCAATA TCAGCCTGGA AATAGCCCAG GGGGAGTTTG TATCCATCAT GGGGCCATCG
GGTTCGGGTA AGTCAACATT GCTGCATATT CTGGGCCTAC TGGAAGAACC TTCCGAAGGC
GAGTATCTGC TCGACGATCA GCCGGTACAA AAGCTTTCCG AGAAAAAACG CACGGAACTG
CACCGGACAC AGATTGGCTT CGTCTTTCAG GCATACCACC TGATTGATGA ACTAACCGTG
TATGAAAACA TCGAAACACC CCTGCTGTAC AAAGGGCTAA GTGGATCGGA GCGGAAAAGC
CGCGTGGCCG AATTGCTTGA CCGGTTCAAT ATTGTTGCCC GGAAAGATTT GTTTCCATCG
CAGTTATCGG GCGGGCAGCA GCAGTTGGTG GGTATTGCCC GTGCGCTGGC CACAGAGCCA
GGGGTTATCT TTGCTGATGA ACCAACCGGC AATCTGCACT CCGATCAGGC CCGTGATATT
ATGGAGCTAT TCCGTGAACT GAACCAGAAA GACGGCGTAA CCATCGTTCA GGTAACGCAC
TCGGAAGTGA ATGCCGAATA CGGGTCGCGG GTGATCCGGC TGAAAGATGG CTGGTTGGAG
CCTTCAGATG TGAAGCTGGT TCAATAA
 
Protein sequence
MIQLNNVSKY YPAGFGRVYV LRNISLEIAQ GEFVSIMGPS GSGKSTLLHI LGLLEEPSEG 
EYLLDDQPVQ KLSEKKRTEL HRTQIGFVFQ AYHLIDELTV YENIETPLLY KGLSGSERKS
RVAELLDRFN IVARKDLFPS QLSGGQQQLV GIARALATEP GVIFADEPTG NLHSDQARDI
MELFRELNQK DGVTIVQVTH SEVNAEYGSR VIRLKDGWLE PSDVKLVQ