| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1197 |
|---|
| Symbol | |
|---|
| ID | 8724930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1457841 |
|---|
| End bp | 1458533 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | DNA repair protein RecO |
|---|
| Protein accession | YP_003386047 |
|---|
| Protein GI | 284036117 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAA AAACACGGGG TATTGCCCTC AGTTATATCC GTTACCGCGA AACGTCCATT
ATTGCCCGCG TGTACACCGA GGAGTTTGGC CTCCAAAGCT ACATTATCAA CAGTGTTCGA
ACGGCCCGGA GTAAGAACAA CAAAATCGCT CTGTTTCAGC CGCTAACCTT GCTGGAGATG
GTCGTTTATT ACAAAAGTGA CCGCGACCTG ACCCGCCTTT CGGAAGTTAA AACGAACTAC
CCTTTTCAAA GCTTACCTTT CGAAGTAGGA AAGTCTACCA TTGCGATGTT CGTGACGGAG
ATGTTGAATA AAGTTTTGAA GGAAGAAGCA GGTAGTCCTG TGCTGTTCCG CTTTTTGGTG
GAATCGGTGG TTTTTCTGGA AGAAGCGACA ACGAATTACG AAAACTTTCA CCTCGCGTTC
CTGCTAAAGC TCTCCTCGTT TCTGGGCTTC GGCCCTGAGT CGGCGCGTGA ATTTGAAGAT
CAGCTTCGGG AAAACTCCTA CCCTTTCCTG CCCGATGAGG AGATGGATAC GGCGCTGAAT
GTCATGCTCC GGCAACCCTA CGGTACGCCC ATTAAATTAA GCCGCTCCGC CCGCAACGAA
CTGGCAGATG CGCTGGTATC GTACTACCAC ATTCACATTG ACTCCCTCGG CGAAGTAAAG
TCATTACCGG TACTGCGGGA GGTATTTGGG TAA
|
|---|
| Protein sequence | MLQKTRGIAL SYIRYRETSI IARVYTEEFG LQSYIINSVR TARSKNNKIA LFQPLTLLEM
VVYYKSDRDL TRLSEVKTNY PFQSLPFEVG KSTIAMFVTE MLNKVLKEEA GSPVLFRFLV
ESVVFLEEAT TNYENFHLAF LLKLSSFLGF GPESAREFED QLRENSYPFL PDEEMDTALN
VMLRQPYGTP IKLSRSARNE LADALVSYYH IHIDSLGEVK SLPVLREVFG
|
|---|
| |