Gene Slin_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1196 
Symbol 
ID8724929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1457025 
End bp1457756 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content50% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003386046 
Protein GI284036116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCA GAACAGAAAA TTTAATAAAG AAATACGGGT CCAGGTTGGT CAACAACAAC 
GTATCATATC AGGTTGAAAC CGGTGAAATC GTGGGACTAC TAGGGCCAAA CGGTGCGGGT
AAAACGACTT CGTTCTACAT GGCTGTGGGG TTGGTAAAGC CCAACAGCGG GAAGGTGTTT
ATCGACGATC TGGATGTGAC TAACCTTCCT ATGTATAAAC GGGCTCGGCT CGGGCTGGGG
TATCTGGCAC AGGAAGCTTC CGTTTTTCGG GATTTATCAG TAGAGGAAAA CGTACTGGCT
GTTCTCGAAA TGACCGATCT TCCGAAAGCA CAGCAAAAAC AGAAGGTTGA GGAGCTGCTC
GAAGAGTTTA GCCTTACGCA CGTTCGGAAG AGCAAGGGAA AGGTGCTGTC CGGGGGCGAA
CGCCGACGTA CGGAAATTGC CCGTGCGCTG GCCGTTGATC CTAAATTCAT TCTGCTCGAC
GAGCCCTTTG CCGGTGTTGA TCCCATTGCG GTCGAGGACA TTCAGAGCAT CGTTGCCAAG
CTCAAACACC GTAATATCGG AATCCTGATC ACCGACCACA ACGTAAACGA AACACTTTCC
ATCACCGACC GGGCCTATCT GCTCTTTGAA GGTAAAATCC TAAAGCAGGG CACCGCTGAG
GAATTGGCCA ACGACGAACA GGTACGCCGG GTTTACCTAG GGCAGCATTT CGAACTGAAA
CGGAAAGTTT AG
 
Protein sequence
MILRTENLIK KYGSRLVNNN VSYQVETGEI VGLLGPNGAG KTTSFYMAVG LVKPNSGKVF 
IDDLDVTNLP MYKRARLGLG YLAQEASVFR DLSVEENVLA VLEMTDLPKA QQKQKVEELL
EEFSLTHVRK SKGKVLSGGE RRRTEIARAL AVDPKFILLD EPFAGVDPIA VEDIQSIVAK
LKHRNIGILI TDHNVNETLS ITDRAYLLFE GKILKQGTAE ELANDEQVRR VYLGQHFELK
RKV