Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1196 |
Symbol | |
ID | 8724929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1457025 |
End bp | 1457756 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003386046 |
Protein GI | 284036116 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCTCA GAACAGAAAA TTTAATAAAG AAATACGGGT CCAGGTTGGT CAACAACAAC GTATCATATC AGGTTGAAAC CGGTGAAATC GTGGGACTAC TAGGGCCAAA CGGTGCGGGT AAAACGACTT CGTTCTACAT GGCTGTGGGG TTGGTAAAGC CCAACAGCGG GAAGGTGTTT ATCGACGATC TGGATGTGAC TAACCTTCCT ATGTATAAAC GGGCTCGGCT CGGGCTGGGG TATCTGGCAC AGGAAGCTTC CGTTTTTCGG GATTTATCAG TAGAGGAAAA CGTACTGGCT GTTCTCGAAA TGACCGATCT TCCGAAAGCA CAGCAAAAAC AGAAGGTTGA GGAGCTGCTC GAAGAGTTTA GCCTTACGCA CGTTCGGAAG AGCAAGGGAA AGGTGCTGTC CGGGGGCGAA CGCCGACGTA CGGAAATTGC CCGTGCGCTG GCCGTTGATC CTAAATTCAT TCTGCTCGAC GAGCCCTTTG CCGGTGTTGA TCCCATTGCG GTCGAGGACA TTCAGAGCAT CGTTGCCAAG CTCAAACACC GTAATATCGG AATCCTGATC ACCGACCACA ACGTAAACGA AACACTTTCC ATCACCGACC GGGCCTATCT GCTCTTTGAA GGTAAAATCC TAAAGCAGGG CACCGCTGAG GAATTGGCCA ACGACGAACA GGTACGCCGG GTTTACCTAG GGCAGCATTT CGAACTGAAA CGGAAAGTTT AG
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Protein sequence | MILRTENLIK KYGSRLVNNN VSYQVETGEI VGLLGPNGAG KTTSFYMAVG LVKPNSGKVF IDDLDVTNLP MYKRARLGLG YLAQEASVFR DLSVEENVLA VLEMTDLPKA QQKQKVEELL EEFSLTHVRK SKGKVLSGGE RRRTEIARAL AVDPKFILLD EPFAGVDPIA VEDIQSIVAK LKHRNIGILI TDHNVNETLS ITDRAYLLFE GKILKQGTAE ELANDEQVRR VYLGQHFELK RKV
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