Gene Slin_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1173 
Symbol 
ID8724906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1432463 
End bp1433452 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content56% 
IMG OID 
ProductLAO/AO transport system ATPase 
Protein accessionYP_003386023 
Protein GI284036093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCATC GACTTCCACC GGATCAGTAT GCAACCGGTA TTCTTGCCGG TAATCGGCTA 
CTGCTAAGTC AGGCAATTAC ACTGATCGAA AGCCGCCGGG CCGACGATCA GGTGTTGGCG
CAGCAGGTGC TGGAGCGTAT CCTTCCGAAC ACCGGAAAAT CAGCCCGAAT TGGTATAACA
GGTGTGCCCG GCGTTGGCAA AAGTACCTTT ATCGAATCGT TCGGCACGTA CTTAACCAGC
CAGGGACATA CCCTCGCCGT ACTCACCGTT GACCCTACGA GCCAGCGTTC GGGTGGTAGT
TTGCTGGGGG ACAAAACCCG GATGGAAACC CTCTCAATGA ATCCAAACGC TTACATCCGC
CCCTCTCCGG CCGGTGATTC GCTAGGGGGT GTGGCGCATC GAACCCGTGA AACGATGCTC
CTCTGCGAGG CCGCTGGTTT TGATATTATT CTGGTTGAGA CGGTTGGCGT AGGGCAATCG
GAAACAGTCG TACACGGCAT GGTCGACTTC TTTCTACTGC TCATGCTGGC TGGAGCCGGA
GATGAGCTAC AGGGCATGAA ACGCGGCATT ATGGAATTGG CCGACGCACT GGCCATTACC
AAAGCCGATG GCACCAACGA GGCAGCGGCC AATCGTGCCC GGGTTGAGTA CCAGAACGCC
CTGCACCTGT TTCCACCCAC CGGTACGGGC TGGTTCCCGC CAGTACTGAC CTGCTCTGCG
GTAACGGCCG ATGGTATAAC CGCTATCTGG CAAACGATAC AGGCACATCA GGCGTTAACG
ACGCAGAACG GACATCGTGC CCACCGGCGA CAGGAACAGC AACTGAGCTG GTTCCGGTCT
TTACTTAGAC AACGACTTGA AAGCCGTTTC TACGAGCAGC CCGGCATACG AACCCAACTG
TCAATTATTG AAGAACAAGT CCGGACAGGA ACCCTCCTTC CGGCTCCGGC GGCTGATCGG
CTCCTTCATT ATTCATCGGG TAATCAGTAG
 
Protein sequence
MRHRLPPDQY ATGILAGNRL LLSQAITLIE SRRADDQVLA QQVLERILPN TGKSARIGIT 
GVPGVGKSTF IESFGTYLTS QGHTLAVLTV DPTSQRSGGS LLGDKTRMET LSMNPNAYIR
PSPAGDSLGG VAHRTRETML LCEAAGFDII LVETVGVGQS ETVVHGMVDF FLLLMLAGAG
DELQGMKRGI MELADALAIT KADGTNEAAA NRARVEYQNA LHLFPPTGTG WFPPVLTCSA
VTADGITAIW QTIQAHQALT TQNGHRAHRR QEQQLSWFRS LLRQRLESRF YEQPGIRTQL
SIIEEQVRTG TLLPAPAADR LLHYSSGNQ