| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1168 |
|---|
| Symbol | |
|---|
| ID | 8724901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1426933 |
|---|
| End bp | 1428378 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003386018 |
|---|
| Protein GI | 284036088 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.685851 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAT ATAAATATTT GCTTTTTACA GGCTTGCTGA CCACAACCCT GGCCTGTAAT
GATTTTGGGG ATATAAATGT AAACCCAAAC AGTGCCCTTT ACCCCAATAC TGCTAGTTTG
ATTACCGGGG CAGAGCGTAC GGTGGGCACT ATAAACTCGC AGGTTGGACC GGGTGGGTTT
AACATTGCCC CTGCTTTATA CGTACAGCAG TTCTCGGACG TAACGTATAT TGAGGACTCC
CGCTACAAGA CAATCAACTT CAGCTACAAC GGCTTGTATT CGGGACCGCT GGTGAACCTT
CAGGCGATCA TTGACCAGAA TACCAATGAA TCGACGCGGG GACTGGCAGC TAGCTATGGC
TCCAATGGGA ACCAGATTGC CATTGCGCGT ATCCTGAAAG CGTATGTGTT TCAATACATT
ACCGACCGTT GGGGCGATGT GCCTTACTCG CAGGCCTTAA AAGCCGATCA GAACTTCTCG
CCCGCTTTCG ACAAGCAGCA GGATATTTAT AACGACCTGT TCAAAGAGTG GAAAGAAGCA
GCAAAGCAGT TCGACGGTGG TAAAGCCGTC AGCGGTGACA TCATGCTGGC CAGCAACGCT
ACCCGCTGGA AAAAATTTGC GGCTTCCCTG CGGTTAATTG CTGCTCTGCG GTTGTCGAAA
GTTGACCCAG CCAAGGGTAA AACGGAGTTT GCTGCGGCCC TGGCCGATGG TGTATTAGCG
TCAAATGCCG ATAACGTGCA GTATAAGTAT CTGGCCGATG CAAATAATGA AAATCCGCTC
TACACGAACT ACGTACGGTC GAACCGGAAA GATTTCGCCC TGAGCAACAC GTTCGTTAAT
TACCTGAAGC AGGTGAACGA CCCTCGTTTG CCCGTCTTTG CGGCCAAGAA CCTGAAAGGT
GAGTACGTAG GTGCTCCTTA CGGTGTTTTC CCGGCTCCGG GTAAAGCTCA GGATTATTCG
CTGGCAGGGG CTGCTATTAG CGCACAAACG GCTCCGGTTA ACATTATGAC CTACGCTCAA
GTGCTGTTTG CTCAGGCCGA AGCGGCTAAA CTGGGTTGGA TTACCGGCGA TGCCAAAGCT
CTGTATGAAT CGGCAATTAA AGCGTCTATG CAGCAGTGGT TAGGTACATC GTATACAGAT
GCCGCTTTTG CCGCCTATAT TGCTCAGCCA GATGTTGCCT ATAGCGATGC CAAGGCCATT
GAACTTATTG GAAATCAGCG CTGGATTGCG TTGTTCTTTC AGGGAACCGA ATCCTGGAAC
GAATGGCGTC GGACGGGTTA CCCAAGTTTA AAACCGGCAC CCACCACTCT GAACGGAGGA
ACGGCTATTC CCCGTCGGTT AGCTTACCCA ACCACAGAAA CAACACTGAA CGCTAAAAAC
TATGCTGAAG TAGTGACCCG TCAGGGAAAA GACGATCAGT ACACGCGCGT TTGGTGGGAT
AAATAA
|
|---|
| Protein sequence | MKGYKYLLFT GLLTTTLACN DFGDINVNPN SALYPNTASL ITGAERTVGT INSQVGPGGF
NIAPALYVQQ FSDVTYIEDS RYKTINFSYN GLYSGPLVNL QAIIDQNTNE STRGLAASYG
SNGNQIAIAR ILKAYVFQYI TDRWGDVPYS QALKADQNFS PAFDKQQDIY NDLFKEWKEA
AKQFDGGKAV SGDIMLASNA TRWKKFAASL RLIAALRLSK VDPAKGKTEF AAALADGVLA
SNADNVQYKY LADANNENPL YTNYVRSNRK DFALSNTFVN YLKQVNDPRL PVFAAKNLKG
EYVGAPYGVF PAPGKAQDYS LAGAAISAQT APVNIMTYAQ VLFAQAEAAK LGWITGDAKA
LYESAIKASM QQWLGTSYTD AAFAAYIAQP DVAYSDAKAI ELIGNQRWIA LFFQGTESWN
EWRRTGYPSL KPAPTTLNGG TAIPRRLAYP TTETTLNAKN YAEVVTRQGK DDQYTRVWWD
K
|
|---|
| |