| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1167 |
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| Symbol | |
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| ID | 8724900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1423621 |
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| End bp | 1426836 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003386017 |
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| Protein GI | 284036087 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAT TTCTATTAAC ACAGTTTGTC CTGTGTTTAT TCGCACTTCC ATTGATAGCT
CAGGATATAG CCATCAGTGG AAAGGTCACA TCGTCGGAGG ATGGTTCAGT GCTTCCCGGT
GTTAACATTA CGGTCAAAGG AACGTCTCGC GGAACCAGCA CCAATGCTGA GGGAACGTTT
CAGCTTAACG CTCCAGCCAA CTCAAGGCTG GTATTTAGTT TTATTGGCTT CACAACACAG
GAAATTGCCA TTGGCAACCG AACAAACATC AGTGTTAATC TTGCCCCCGA CGCGTCTCAG
CTTCAGGAGG TTGTCGTTAC GGCGCTGGGT ATCTCCCGCG ACAAGAAGGC ACTGAACTAT
GCCGTTCAGG ACCTGAGAGC CGATAAACTA AACTTTGCAC GTGACCAGAA TGTGGGTAAC
GCGCTGGCGG GTAAAATTGC CGGTGTGCAG GTACTCGGTC AGTCGGGGGC TAAGTTCGGT
AACCCGAACA TCCGCATCCG GGGCGTTAAC TCGCTGTCGG GTGGCGACCC GCTCTACGTT
GTAGACGGTA CGCCAACGGA CATTAGCCAG GTGAACATGG ACGATGTAGA GAACCTGACC
GTGCTGAAAG GACCCTCTGC AACGGCTCTG TATGGTAACC GTGCTTCGGC GGGCGTTATC
GTCATCACAA CTAAGCGTGC CAAAGCCGGC GAAACCCGTC TGGACATCAA CCACAGTACA
ACGCTCGACA TGGTGGCTCT GCTGCCTAAG TACCAGAACG AATACGGTGG TGGTTACTCG
CAGGAGTGGG AAACGTTCCA GTTCGATCCA TCCATTCACC CGGCGGCATG GTCGTCGTTC
AATGGGCAGA AAATTCTGGA CTACTCGGCC GATGAAAGCT GGGGTCCCCG TATGGATGGC
TCACCCCACC GGTCGGCGTT TTCCTGGCAG CCAGGTGCTG AATTTGGTCA GCTGACGCCG
TTCTCGCCAC AGCCCAACAA CGTACGCGAC TTCTTCGAGA AGCCGATCAG CAACAACACG
AATATTGCCT TTTCGCGCGG AACGGAGGCT TTTCAGAGCC GTATCTCCTA CACGCACATC
ATCAACAACG GGATTATCCC CAACTCGTCG CAGTCTCGTG ATTACGTCAG TGCGAAGAAT
GCCATCAAGT TTGCTGAGAA ATTAACAGCG AACCTGAATT TCAACTACAC ATCGACAAAC
ACGAAAAACC AGCCTGCCGA CCGCTATGGC TCATCGGGAG GAACAACGCC ACAGAACAGT
CCGCTGGGTA TCTCCAACTC GACCCTGAAC GGCTACAACC AAACGATTGG TATGTTCAAT
CAGTGGTTTC AGCGTCAGTT ACGGATTGAG GATTTGCGTA ATTACAAAAA TCCGGATGGT
ACCTTCCGTA GCTGGAACAT CGGCGGTCCC TTGGAAGCGG CCCCTAAATA TTGGGATAGC
CCATACACGC AGGCCTACGA AAATACCAAC ACCAACCGGA GCGACAGGTT ATTTGGTGAC
ATTGGCCTGA CTTACCAGTT CACACCGGCT CTGAAAGCAT CGGCTACGGT ACGCCGTGAC
CAGAACGCTT ACTATCAGCA GGGCCGAGTG GCAATTGGTA CACTGAATGA AGGACAGAAA
GGTGGCTTCT CGACCTTAAC CTCCAACAGC CGCGAAAACA ACTATGAGTT GCTGGTGAAC
TACAACGAGA ACTTCAAAAA CTTGTCTGTT GTCGCCAACG CAGGGGGGAA CATCCGCTAC
AACCGTGTTG ATGGTCTTTT CCAGGCCACA GTAGGGGGCT TATCGGCACC AGGTTTCTAT
AACATCGCGG CTTCTATTGA CCGGCCATTA TCCAACAACT ACCTCTATGA GCGCCGGATC
AACAGTGTGT TCGGAAACGT AAGTGTTGGT TTCCGTGACT TTGTTTTCGT TGAAGCTTCG
ATCCGGAATG ACTGGTCGTC TACGCTGCCT AAAGCGAACA ACGCCTATCT GTATCCGTCG
GTGTCGGCCG GTGTTATCCT GACCGAATTG CTGCCCAAGA GCCAGGTACT TTCCTATGCT
AAAGTTCGGG CGGGCTATGC TCAGGTGGGT ACCGATGTTG GCCCTTACCA AACAGCCCTG
GCGTATACCT CTGGTCAGCC TTATGGCAGC AATGCAACCG CCTTTTTGCC CGGCACATTG
CCCAACGCCA GTCTGAAGCC CGGCCTATCG TCTTCCTATG AAGGCGGTAT CGACCTGAAA
TTCCTGAACA ACCGGATCGG TGTGGAATTT ACTGCCTATC AGAATGACAA CAAGAACCAG
ATCATTCCGC TGCCGGTAGC GCCTACGAGC GGGTATACCA ATGCCGTAGT AAACGCCGGG
TTGATCCGTA CGTCGGGTCT TGAATTGCAC ATTTACGCTA ACCCAATCCG GTCGGCGTCT
GGCTTTAACT GGGAGTTCGA CATCAATGCA GACCGCAACC GTTCGCAGGT GATTGAACTG
GCCAATGGCC TGACCAACTA CCAGATCGAC GGCCCACAGT GGCGTACACT GACGCTGAAC
GCCCGTACTG GTACCGATGG CTCACCCCGC GACTGGGGTA CGCTTGTGGG ACAGGGGATT
CAGAAAGACG CGAATGGTCG GAACATGGTA TATGGCAGCG GTGCAAACGC CGGTCTGTAT
ATCAAACAGG ATAACGTTGA GCTAGGCTCG GTACTGCCCA AGTTCAAAGG CGGCTGGTTG
AATACCTTCA GCTACAAGAA CGTGACCCTG CGCGTAAACA CTGACTTCGT TGTAGGTGGT
AAATTCTTCT CGACCACCAA AATGTTTAAT GCTTACTCGG GTTTGGCAGC TGAAACAGCG
GGTCTGAACG AATTGGGTAA GCCACTGCGT GATGATCCGG CTTCGGGCGG AGGTGTTTTG
CTGGATGGTG TAACCGAAGA CGGAAAGCAA AACACGACTC GTGTTGATGC ACAGAACCTG
TACGAAAACT GGCTGTTCGC CCTGAACGAG CGCTGGATTT ATGACAAAAC GTACGTGAAA
CTGCGCGAAG TTTCGTTCGG TTACAACCTG CCGAAGCAAA TGCTGGGCAA GTGGTTGAAG
TCGGCAAATA TTTCGTTGAT TGCCCGTAAC CCGGTTCTGA TCTACAGTGC CATTGGCGGT
GGTATCGACA TCTCTGAGTC GGAGACGATC TGGTACGAAG GTGGTCAGTT ACCTCCGGTT
CGCTCGTTCG GTGTAAATCT TAGATTAGGC CTCTAA
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| Protein sequence | MRKFLLTQFV LCLFALPLIA QDIAISGKVT SSEDGSVLPG VNITVKGTSR GTSTNAEGTF
QLNAPANSRL VFSFIGFTTQ EIAIGNRTNI SVNLAPDASQ LQEVVVTALG ISRDKKALNY
AVQDLRADKL NFARDQNVGN ALAGKIAGVQ VLGQSGAKFG NPNIRIRGVN SLSGGDPLYV
VDGTPTDISQ VNMDDVENLT VLKGPSATAL YGNRASAGVI VITTKRAKAG ETRLDINHST
TLDMVALLPK YQNEYGGGYS QEWETFQFDP SIHPAAWSSF NGQKILDYSA DESWGPRMDG
SPHRSAFSWQ PGAEFGQLTP FSPQPNNVRD FFEKPISNNT NIAFSRGTEA FQSRISYTHI
INNGIIPNSS QSRDYVSAKN AIKFAEKLTA NLNFNYTSTN TKNQPADRYG SSGGTTPQNS
PLGISNSTLN GYNQTIGMFN QWFQRQLRIE DLRNYKNPDG TFRSWNIGGP LEAAPKYWDS
PYTQAYENTN TNRSDRLFGD IGLTYQFTPA LKASATVRRD QNAYYQQGRV AIGTLNEGQK
GGFSTLTSNS RENNYELLVN YNENFKNLSV VANAGGNIRY NRVDGLFQAT VGGLSAPGFY
NIAASIDRPL SNNYLYERRI NSVFGNVSVG FRDFVFVEAS IRNDWSSTLP KANNAYLYPS
VSAGVILTEL LPKSQVLSYA KVRAGYAQVG TDVGPYQTAL AYTSGQPYGS NATAFLPGTL
PNASLKPGLS SSYEGGIDLK FLNNRIGVEF TAYQNDNKNQ IIPLPVAPTS GYTNAVVNAG
LIRTSGLELH IYANPIRSAS GFNWEFDINA DRNRSQVIEL ANGLTNYQID GPQWRTLTLN
ARTGTDGSPR DWGTLVGQGI QKDANGRNMV YGSGANAGLY IKQDNVELGS VLPKFKGGWL
NTFSYKNVTL RVNTDFVVGG KFFSTTKMFN AYSGLAAETA GLNELGKPLR DDPASGGGVL
LDGVTEDGKQ NTTRVDAQNL YENWLFALNE RWIYDKTYVK LREVSFGYNL PKQMLGKWLK
SANISLIARN PVLIYSAIGG GIDISESETI WYEGGQLPPV RSFGVNLRLG L
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