| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1166 |
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| Symbol | |
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| ID | 8724899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1419615 |
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| End bp | 1422869 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003386016 |
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| Protein GI | 284036086 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.689476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG CTCTAATAGG AAGCTGGCTG CTATTGCTGT TGGTTGGTTT GCCTGTGTTA
GCCCAGGAAA TAGCCATAAC TGGCCGGGTC ACCTCATCAG ATGATGGCTC CGCATTGCCC
GGTGTGAGTG TTGTCGTCAA AGGATCGACC CGCGGCACCA CAACCGATGC CAATGGTACT
TATCAGATAA ATGCAGGCTC CGCCACTACA CTGACATTCT CGTTCGTTGG CTTCAAACCA
CAGGATGTAG CGGTGGCTAA TCGTACGACA ATCAACGTAG TTTTAGCCGC CGATGCCTCC
ACACTGAACG AAGTCGTTGT TACAGGATTC GGGATTCGGC GCAACGAGCG CGAAATTGGC
ACATCTGTTA CCAAGATCAA TAACACATTG ATCAACCAGG CAGCTCCCGT TAACCTGGCG
AATGGCCTGA CCGGTAAAGT GGCCGGGCTG CAGATCAACG CGGTCAATAA CGGCGTCGGT
TCGAACCCCC GCATAACCAT TCGGGGAAAT CGTTCGTTTC TGGGCAACAA CCAGGCGCTA
CTGGTCGTAG ACGGTGCTCT GACGGACGTG AGCTTTCTGT CGGCCATCAA CCCCAACGAC
ATTGAAAGCA GCTCCATCTT GAAAGGGCCG AGCGCAGCGG CTTTGTATGG TTCCGACGCG
GCTAACGGTG TACTGGTCAT TACAACCCGG CGCGGTACAA CCAACAACAA GCCCCAAATT
TCTTACACTA ACAACACCCA GTTGGAGAGT GTGTCGTACA TGCCTGATCT ACAGCGCCTG
TATGGCTCCA ATGGGGGCGA AGGTGCTCCT TTTCTGGATG CCAACGGCCA GCGGCTTTAC
GTACCTTATG AGAACCAGCA GTTCGGCCCT CTGTATGATG GCTCATTACA GCCGCTGGGT
TACGGGGTGC AGGTCATAAA CCCTGATGGG TCTATTCGGA TCGATACGCT GAAAGTTCCC
TATGCGTCGA CAGGAAAAGA CCCGCGCCGT GCGTTTTTTA ACACGGGGGT TACGCAGCAG
CACGACCTGG CCTACCGGGT GGGCGATGCA CAGAATTACT TTGGACTTAG TGTGCAGCGC
GTCGATCAGA AAGGGATTGT TCCTAACGAT AAATACAGCC GTACCAACTT CACGGTGAAC
GGTGGCCGGG CGGTAGACCG CTTTACGGCC AATGCCAAGA TGCAGTTCAC TTACGAAAAT
ACGGATCAGG AGAACGGCGA TTTCGGCCAG GGACGCCCGC TATACTGGAA CCTGCTGAAC
CAGCCCGCCC ATGCACCACT CACCGATCCG CGTATTAAGG ATATTAACTC CCCTTACGGC
GATGTGAACG GCTATTTCAA CGCCTACTAC CCAAACCCCT GGTGGCAGGT AACCGGCGAC
AACTCGCGGG CCGTTACCAA CAAATACTCG ATTCAGGGGA CGGCCGATGT TGGCTACAAA
TTCACCGATT GGCTCAATGT TACCTATCGG GTGAGTGGTC AGGTATCCAA CACACAGTTT
AAATCGCACC TGGCGGCTGT TTCGTTCAGC ACCTACGCGC TCGGCGACCC CTGGGGTGCG
GGGAACATTG CCTCATCGCT GAAACAGGTG AACGGTAACG TGAGTGATTA TAGTCGTACG
ACCTCCCGCG TGACAGGTGA CCTGCTGATT ACGATAGCTC CCAATTTTGG TGACTTCACT
ACCAAGCTGA TTCTGGGGCA GCAGGCCCGG GTCGACTATT CACGGTACAT CTCCACGACG
GCAACCTCAC TCGTAGTGCC CGGTACCTAT AACATCGCCA ACCGGCTGGG TAATGTGCTT
GCCAGTGAGA ACTCCTACCA GAGTCGGCTG TTAGGTTATT TTTATGATTT CACGGCCGGG
TTCCGGAATT TCGCCTTCAT CAACGCCACC GGTCGTTACG ACAACACCTC GTTGCTGGCT
GCTGGCAACC GGTCCTATTT TTACCCTGGT GTGAATGCGT CGGTTATCCT GACCGAAGCC
ATTCCTGCCC TGAAGGGGAG TAGCGTCCTT TCCTATCTGA AGGTGCGCGG GGGTATTGCC
AGAGCAGGGA ATATCAGCGT TGGGCCTTAC CAGTTGCAGA ATGTATTTAA CCCCGGATCA
GGCTTCCCCT ACGGTAGCCA GCCCGGCTTC TCGCTCAGCA CTCAGCAGAA CGACCCTAAC
CTGAAGCCCG AGTTCACCAC GAACAAGGAA GTAGGTGTTG AGTTTGGCCT GTTCGACCGG
GTCAATGCCG AAGTCGTGTA TTACACGATG GAAACCATTA ACCAAACGGT TCCCATTCAG
GTTTCGCGGG CTACGGGCTA TGGCAGCGCG CTGATCAATA CAGGTACTAT GGTCAACAAT
GGGCTTGAAG TGGAGTTGAA AACCCTCCGG CCGATTGTTA ATACCGGTGG CTTTACCTGG
AATGTCAATA CGAACTTTAC CTACCTCAAC AATACGGTAA CGTCCGTTTA TCCGGGCCTG
GATCGCATCA ATATTACGCA GTCGAATGGG GCGCAATCGG CTAACGTGTT TGCCGCTGTC
AATTATACGT ATCCAGCTTT ATTCGGTACT GATATTGCCC GTGTGCAAAA CACCGATCCC
AATGCGGCCT ATTACGATGC AACGGGCCAG TTTGTTGGCC AGCCGGTTAT TAACCCATCA
ACGGGCTACC CCATTCTGGA CGCCAATATC AAGTACCTGG GCAACACACA GCCAAAATAC
CGGTTCGGGT TCAACAACAC TTTCGCCTTT AAAGGACTGA CACTGAACGC CCTGGTCGAG
TACCGGGGGG GCAATGTGAT TTACAACCAG TTGGGTAACG CACTGGAGTT TACAGGTGCC
GGTATTCGGT CGACTTACAA CGGACGGCAG AACTTCGTCT ACCCGAACTC TGTGCTGGCC
ACCACCAACC CCGATGGAAC CACCACCTAT GCGCCCAATA CCAGCGTGTC GACCCGTGAT
GGCAATCTGG AGTTCTGGAC GAATTCGGGC TATCACAATG CCGTGTCGAG TTACGTGACA
AGTGCGGCCT TCTGGAAGCT TCGTGAAGTA GCGTTGAGCT ACAACTTCCC TACCCAGTTG
TTCAGCAATA TCAAGTTTAT CCGATCACTG ACCCTTGGCT TAACAGGCCG CAACCTGCTG
ATGCTTCGGC CGAAAACAAA CGTATTCACG GACCCCGAGT TTTCGGTGGA CAACAGCAAT
GCCCAGGGCG TTACGAACGA ATACCAGACA CCACCAACCC GCCAGTACGG TTTCCGGCTG
AGCGTTGGGT TTTAA
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| Protein sequence | MKKALIGSWL LLLLVGLPVL AQEIAITGRV TSSDDGSALP GVSVVVKGST RGTTTDANGT
YQINAGSATT LTFSFVGFKP QDVAVANRTT INVVLAADAS TLNEVVVTGF GIRRNEREIG
TSVTKINNTL INQAAPVNLA NGLTGKVAGL QINAVNNGVG SNPRITIRGN RSFLGNNQAL
LVVDGALTDV SFLSAINPND IESSSILKGP SAAALYGSDA ANGVLVITTR RGTTNNKPQI
SYTNNTQLES VSYMPDLQRL YGSNGGEGAP FLDANGQRLY VPYENQQFGP LYDGSLQPLG
YGVQVINPDG SIRIDTLKVP YASTGKDPRR AFFNTGVTQQ HDLAYRVGDA QNYFGLSVQR
VDQKGIVPND KYSRTNFTVN GGRAVDRFTA NAKMQFTYEN TDQENGDFGQ GRPLYWNLLN
QPAHAPLTDP RIKDINSPYG DVNGYFNAYY PNPWWQVTGD NSRAVTNKYS IQGTADVGYK
FTDWLNVTYR VSGQVSNTQF KSHLAAVSFS TYALGDPWGA GNIASSLKQV NGNVSDYSRT
TSRVTGDLLI TIAPNFGDFT TKLILGQQAR VDYSRYISTT ATSLVVPGTY NIANRLGNVL
ASENSYQSRL LGYFYDFTAG FRNFAFINAT GRYDNTSLLA AGNRSYFYPG VNASVILTEA
IPALKGSSVL SYLKVRGGIA RAGNISVGPY QLQNVFNPGS GFPYGSQPGF SLSTQQNDPN
LKPEFTTNKE VGVEFGLFDR VNAEVVYYTM ETINQTVPIQ VSRATGYGSA LINTGTMVNN
GLEVELKTLR PIVNTGGFTW NVNTNFTYLN NTVTSVYPGL DRINITQSNG AQSANVFAAV
NYTYPALFGT DIARVQNTDP NAAYYDATGQ FVGQPVINPS TGYPILDANI KYLGNTQPKY
RFGFNNTFAF KGLTLNALVE YRGGNVIYNQ LGNALEFTGA GIRSTYNGRQ NFVYPNSVLA
TTNPDGTTTY APNTSVSTRD GNLEFWTNSG YHNAVSSYVT SAAFWKLREV ALSYNFPTQL
FSNIKFIRSL TLGLTGRNLL MLRPKTNVFT DPEFSVDNSN AQGVTNEYQT PPTRQYGFRL
SVGF
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