| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1161 |
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| Symbol | |
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| ID | 8724894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1410196 |
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| End bp | 1412691 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Patched family protein |
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| Protein accession | YP_003386011 |
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| Protein GI | 284036081 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTTA CCGCTCCTGC CATTCTGTGG GGCAAACGAT GGGCTTATTC GTCGTACGCC
ACCGTTTTTC CGTACCTTGC AGACTTATTT CGCGTTCATT CAGGTATGAT TTGGCACCGT
ATCGCATCGT TTATTTTAAC AAATAGAATC GTTTTATTAG TGGCCGTGCT TCTGGGCACA
GTTTTCATGG GGTATCAGGC CAGCAGAGTC AAGCTGTCGT ACGAACTGGC GAAAATCCTG
CCCGTTACCG ACCCCGATTA CCAGCGTTAC GAGGCCTTTA AATCGCGCTT TGGGCAGGAT
GGCAGTGTGA TGGTACTCGC CATTGAGACC GATAGTATGT ATCAGCTCGG CTTTTTCAAC
GACTGGTACG CACTGGGACA GAAAATCCGT CGTATCGAAG GCATCAAAGA TGTAGTTTCC
AACGCAAATC TCGTCGGCGT CACCCGCGAC GATTCGGCGC ATACGTTCCG CGTTCGTCCG
CTAATTTCGG GACCACTCAC GTCTCAATCC GGTCTCGACA GCCTGAAAGC GCGCATTGCC
TCCCTCCCCT TTTACCGGGG TTTGGTGACC GACAGCAGCG GGCGGGCGCA CCTGATGGCG
ATTACCTTCG ACCAGAAAGT GGTCAATACC AAGAATCGCA TTTCGCTCGT CAGACGAGTC
GAAGCCGTTG CGGATTCGTT TGGTCGGCAG CACCAGCTGG TTAGTTCAAT GGCCTCACCA
TCCGACGGCA CGGTTCACAT GTCGGGGATG CCTTACATAC GCACTGAATT TACAGCTAAG
GTCAGTAAAG AGATGTTTCT GTTTCTGGGG CTGGCGTTTC TGGTCACGGC CCTGATTCTC
TTTTATTTTT TCCGTTCGTT CACGGTCGTA CTGGCAGCGC TGGCGGTCGT TGGTGTCGGC
GTAATCTGGG CGACGGGCTA CATTGTTCTG CTGGGTTACG ACATCACCTT GCTAACGGGT
CTGATTCCTC CCCTGATTAT CGTTATTGGT GTTCCGAACG TCATTTTCCT GCTTAACCGC
TACCACGAGG AGCTCAACCG GCACCGGAGC CAGCACGAAG CCCTGATGAT CGCTACCGAG
AAAGTGGGCG AAACGACCTT CTTTGCCAAC ATCACCACAA GCATCGGCTT CTTTGTCTTT
TATTTTACCG GCAGCCCCCT TCTGGTTCAA TTTGGCCTGG TATCGGCCTT TGGGATCATG
ACGACTTATG CCGTGTCGCT CATCCTGACG CCCATCATTT TCAGTTACCT GAAGCAGCCA
TCCCCTAAGC AGCGCGGCCA CCTGGAACGC AAGCAAGTGA GCGGTTTTCT GACCTGGGTC
AATCATCTGG TACGCACCCG CCGAACGGCC ATCTATACGT TTATCGGCAT TTTGACGGCT
ATTTCTATTG TAGGGGCGCT ACAGATAAAC CCCATTGGTT TCATAGTGGA TGATCTGCCA
AAAAATGACC CGATTTATAC CGATCTGAAA TTCATCGAGA GTCGGTTCAA GGGCGTAATG
CCCTTTGAAG TGAGCATCGA TACCAAACGC GCTGGGCGGG TGCTTACGCC CCAGACGTTA
ACCAAAATAA AGCTGCTTGA GCGGGAGTTC AACAAATACG GCGAGTTCAC CCGCCCCCTT
TCGCTGGTTG AAGCGGTCAA GTTCCTGTAT CAGGCTTACC GGGGTGGCGA CCCCAAATAC
TTTGCCCTGC CCGGTGCGCT CGAATTAAAT CAGCTTGCCA GCTACGCGCC CCAACTGAAA
GGAGCCAAAA ACGCGGGCGG AGGGCTGGCG TTCAAAGCTT ACCTCGACAG CACGTATCGC
TACACCCGCG TAAGTTTCCA GATGCCCGAT GTGGGCACCG TGCGGACTAC CCAGCTACTC
AAGGAGTTGC AACCCAAAGC CGACTCGATC TTCAACATAG ACCGCACAAC GGGAAAGCGG
GTTGCCGCTG ACGAAGCCTA CGACGTACAC ATTACCGGCA ACAGCGTGGT CTTCACCCGT
GGTAACGACT ACCTGCTGAA AAACCTGGCT GAAAGCACCG TGCTGGCCAT TTTGCTGGTT
TCCGTAATCC TGATCATCCT CCTGCGCGAT GTACGTCTAA GCCTGATTGC CATTCTGCCG
AGCGTTGTAC CGCTCATTGT AACGGCCGGT ATCATGGGAT TCTGCGGCAT TCACCTGAAG
CCTTCGACTA TCCTGATTTT CAGCATTGCT TTCGGCATTT CGTCTGACGG CACGATCTAC
TTTATTACGA AGTACCGGGA TGAGTTACGA AACCAGAAAA TGACGCTGGA CCGTGCCGTT
TCGGAAACGA TTCGCTACAC GGGCATCAGC ATGTTCTACA CGGCCATGAT TCTGTTTGCG
GGTTTTGCCA TCTTTGCCGC ATCGACCTTT CAGGGCACCG TAGCGCTGGG CATTCTGGTA
TCCATTACCC TGCTCATGGG CATGGCCTCC AACCTGATTC TCCTCCCCGC CTTCCTTCTG
ACCGTCGACA AACGGAGGAA GAGAAAAGAT GTATGA
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| Protein sequence | MGFTAPAILW GKRWAYSSYA TVFPYLADLF RVHSGMIWHR IASFILTNRI VLLVAVLLGT
VFMGYQASRV KLSYELAKIL PVTDPDYQRY EAFKSRFGQD GSVMVLAIET DSMYQLGFFN
DWYALGQKIR RIEGIKDVVS NANLVGVTRD DSAHTFRVRP LISGPLTSQS GLDSLKARIA
SLPFYRGLVT DSSGRAHLMA ITFDQKVVNT KNRISLVRRV EAVADSFGRQ HQLVSSMASP
SDGTVHMSGM PYIRTEFTAK VSKEMFLFLG LAFLVTALIL FYFFRSFTVV LAALAVVGVG
VIWATGYIVL LGYDITLLTG LIPPLIIVIG VPNVIFLLNR YHEELNRHRS QHEALMIATE
KVGETTFFAN ITTSIGFFVF YFTGSPLLVQ FGLVSAFGIM TTYAVSLILT PIIFSYLKQP
SPKQRGHLER KQVSGFLTWV NHLVRTRRTA IYTFIGILTA ISIVGALQIN PIGFIVDDLP
KNDPIYTDLK FIESRFKGVM PFEVSIDTKR AGRVLTPQTL TKIKLLEREF NKYGEFTRPL
SLVEAVKFLY QAYRGGDPKY FALPGALELN QLASYAPQLK GAKNAGGGLA FKAYLDSTYR
YTRVSFQMPD VGTVRTTQLL KELQPKADSI FNIDRTTGKR VAADEAYDVH ITGNSVVFTR
GNDYLLKNLA ESTVLAILLV SVILIILLRD VRLSLIAILP SVVPLIVTAG IMGFCGIHLK
PSTILIFSIA FGISSDGTIY FITKYRDELR NQKMTLDRAV SETIRYTGIS MFYTAMILFA
GFAIFAASTF QGTVALGILV SITLLMGMAS NLILLPAFLL TVDKRRKRKD V
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