| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1158 |
|---|
| Symbol | |
|---|
| ID | 8724891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1408441 |
|---|
| End bp | 1408986 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_003386008 |
|---|
| Protein GI | 284036078 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAA AAGTACTTCT CGCAGTAGTT TATTTTGCTT CGTTTGGCAT CCTTAAAGCA
CAAACCGTAC CCACTGTAAC TCAAGATCTT ACCGACGTAC CCACCGTAAC ATCTGCTGAA
GAAAGCTTTT ACGATCAGAT TCCTCTCGTT AAAAATGTAA TTGGTTTCGC CAAAGACCAC
CTTTCCATCC GCTACCGTTC AGGTGGCACA ACGACAAGAG GGTTTGACTG TTCAGGATTC
ACCCGCTTTT GTTACAATAA GTTTGGCATT TCGCTTCCTC ATTCCAGTGC TGCCCAGGGT
AACGTAGGTA AGCCTGTCGA CAAAGAATCC GCACAACCCG GCGATTTAAT TCTCTTCAAA
GGACATAGTG CATCCGGCAA ACGCATTGGT CATGTTGGCC TGATTACCGA AGTAGTGGGC
GACCGCATCA AATTCATCCA CTCCGCCTGG AATGGTGGAG TCCGTTACGA TTACTTACAT
GCAGGTTACT ACCATCGCCG TTTTATGGGT ATCCGACGCG TTGTTCATTT GTTAGCCGAA
AAATAA
|
|---|
| Protein sequence | MTKKVLLAVV YFASFGILKA QTVPTVTQDL TDVPTVTSAE ESFYDQIPLV KNVIGFAKDH
LSIRYRSGGT TTRGFDCSGF TRFCYNKFGI SLPHSSAAQG NVGKPVDKES AQPGDLILFK
GHSASGKRIG HVGLITEVVG DRIKFIHSAW NGGVRYDYLH AGYYHRRFMG IRRVVHLLAE
K
|
|---|
| |