Gene Slin_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1152 
Symbol 
ID8724885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1403969 
End bp1404688 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content53% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003386002 
Protein GI284036072 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAC GATCCTTACT TTGTCTCATC CATGGTCACG GCGTAGATGC TTCCATTTGG 
GGTAGCGTCT ACGCCGATTT GGCTTTGGAC CATCAGGTTT TAACCCCTGA TTTTTCGCGG
CTTACCCACC TCACAACTAT TGAGGCCTAT GCCGATGCAC TGTACGACCA GCTGGCGTTG
GCCGACGGCC AAAAAGTCAT TCTGGCAGGT CATTCAATGG GCGGTTATAT AGCTCTTGCC
TTTGCCGAAA AGCATCCGGA TCGGGTGCAG GGGCTGGTTT TGTATCATTC GACCGCTGTC
GCCGATGACG AAGCCAAACG GCAGGCTCGT CAGCAGGTTA TTCAGGAGTT GCGGACTAGC
GGAACGCAAC CGTTCATTCA TAAACAAATG CCCAAAATGG TGGCTCCGTC CTATGCACCC
GAACGAATAG AAGCACTGGA GGACCGGTTC AGAAATCTAC CGGCCGAAGC ACTCATTGCC
GGTATAAAGG CCATTGCCAA CCGACCCGAC CGGACGGCTG TTATACGGGA TGCCCGTTTT
CCTGTTCTGC TCATTCTGGG CCGGGACGAC CAACTTATAC CGTACGAAAA AACAGCACAA
TTGGCCGACC TGTCCAGCCG AATCAAGCTA GTCACCATTG AACAGGCCGG ACACCTGAGT
ATGGTCGAAC AGCCCGCTCA ATCGACGGCT GTTCTTCGGG ATTTTGGTGG TCAATTTTAA
 
Protein sequence
MSQRSLLCLI HGHGVDASIW GSVYADLALD HQVLTPDFSR LTHLTTIEAY ADALYDQLAL 
ADGQKVILAG HSMGGYIALA FAEKHPDRVQ GLVLYHSTAV ADDEAKRQAR QQVIQELRTS
GTQPFIHKQM PKMVAPSYAP ERIEALEDRF RNLPAEALIA GIKAIANRPD RTAVIRDARF
PVLLILGRDD QLIPYEKTAQ LADLSSRIKL VTIEQAGHLS MVEQPAQSTA VLRDFGGQF