| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1136 |
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| Symbol | |
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| ID | 8724869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1389229 |
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| End bp | 1392225 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003385986 |
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| Protein GI | 284036056 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.028233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.759049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAACT TACTGACTGT GAAGCAATTG ATCCGACTTT CGCTAATCGT TGTTCATTGT
ACATTATTCA TTACCCTTAA ATCCTTCGCC CAGTCACCGG GTACAATCAG CGGGCAGGTA
GTGGATTCGT TAACCCGAAA GCCTTTGCTT GAAGCGTCGG TATCGCTTTT ATCGGCAAAG
GATTCCTCAC TGGTAAATTT TGGTATTACA GATGGAGAAG GACGTTTCTC GTTTCCCAAA
ATAGCCGAGG GACAATACCG CGTGCTGATT ACGTATGTGG GTTACCGTAG CCGTGCCCGT
CGGGTTGTGG TCACCAAAAC CGACCCGTCG CCAAACGTTG GTGCTATTGA TTTGGTCGCT
CAGTCGCAAA CGCTGACGGA AGTGTCTGTA CAGGGCGAAC GGGCACCCAT TGCCGTAAAA
GGCGACACGC TGGAGTTTAA TGCCGGTTCG TTCAAAACCC GTCCTAATGC TCAGGTAGAA
GAGTTACTGA AAAAACTGCC GGGCGTAGAA GTCGACCGGG ATGGTACCGT TAAAGCGCAG
GGCCAGGCTG TTACGAAAGT GCTGGTAGAC GGAAAACCTT TTTTTGGCAA TGACCCCAAA
ATGGCCACCC GAAATCTCCC TGCTGATATT ATCGACAAAG TACAGCTCTT CGATCAGGCT
TCGGAGCAAT CCGCCTTTTC GGGCGTGGAT GACGGCGACC GCGAAAAAAC CATTAACATC
ACCACCAAGA AAGACAAACG GAAAGGGTCT TTCGGGCAGC AAAGCATTGG CGTCGGTCCT
CAAACCGGCG ACCGGAGCGC CGGACCGGAT GCCCGGTATT CGGGGCGGGT GAGTTTAAAT
CGATTTAACA ATGGTCGTCA GATTTCGGTG TTAGGAATGG CGAACAACGT CAACCAGCAG
GGTTTCACGG CGCAGGATTT GGGGCTCGGC GGCAACTTCG GCGGGGCAGG TCAGGGCCAG
GGTGGTGGCG GAGGTGGTGG CGGCAACGTG GTTCGTGGGG GCCAGGGTGG CGGTAATTTT
GGCGGACAGA ATCAGGTTGG TAGCAACGCC ATCACGCAAT CGTGGGCGGC CGGTATCAAC
TACCGCGACG GCTGGGGTAA AAAAATAGAT GTTGTGAGCA GCTACAACGC CAGCAATACG
AACACCCTCA CCCAGCAAAG CAGCCGCCGG GAAAACGTTT TGCCCGGCGG AGCAACTACA
CGGTCGGACT CGTCTTTCGT ACGGAATCAA ACGAACGGTT CAGACAATAC AAATACCAAC
CACCGGGTTA ACTTACGACT CGATTATCGG CTCGATTCCC TGACCACAAT TCGTCTTATA
CCGAGTTTGT CGTGGCTAAA TTCGTCGTAC AGCAACCAAA GTGATGCCCG AACGGTAAAT
GCACAGGGGG CATTGGCTAA CGCAAGCACA ACGAATTACA ACTCCGTAGG GGATGGCTTT
ACCGGTAATA ATTCGTTGCT CTTGTTCCGG AAGTTCAGGA AGCGCGGTCG TACTTTTTCG
GTCAACTGGA ACATTGCCCT GAACGATCAG GATAATCAGG GCACCAATAT GTCCGTCAAT
CAATTTACCC GTTCTAATGC GCCGATCTCA ACGACGGGCA CATCAGGAAC AGCGACAACA
GGGCAGGCGG ATACCACAGG CTTGTTCAGG CAGGTAATCA ACCAGCGCAA CAACCAGCAA
ACGAACTCCA TGACCAACAG CGTAAACGTG AGTTACACGG AACCGCTGTC CATGCGCCAA
ACACTGGAGT TTCACTACCT CTTGTCCAAT AACCACAACA CGTCGAACCG GGCGGTCAAT
GATTTTAACG AGGCCACCAG CCAATACGAC TTGCCCAATA CGGTGCTGAG CAATCGGTTT
GTAAACGACT ACGTGACCAA CCGCGCCGGT CTGACGTGGC AAACCAAGCG ATTGAAATAC
ACTTATGCCT TCGGGCTGGA TGGGCAGCAG GCAAGTCTAC AGTCAACTAA CCTAAGCCGC
GAAACCAACC TGAGCCGGAC GTTTACGAAC TTGCTCCCCA ATGCGTTGCT TACCTATAAT
TTTGCCAAGC AGCGTACATT GCGCTTTAAC TACCGTACCC GCATTAACGC GCCGTCGGTA
AATCAGTTGC AGCCGGTTGC GAATAACACA AACCCGCTGA ACATACAACT CGGTAACCCT
GATCTACAGC CCGAATACAG CCATAATATC TCGCTGAACT TCAACCGGTT TGAGCCGTCG
ACGTTCCGGA ATTTGTTTGC GTCGATAAAC GCCAGCCGGA CAGATAACAA AATTGTGAAC
TCAACGGTAT TTACCCAATC GGGCGCACAG ACCACAACAC CGATCAATAC AAATGGGTAT
TACACGGTCA ACGGGTTTCT GGTGTTAGGG CAGCCGGTTA AGATTGGTAC CCAGAAAACG
AATCTGAACC TGCGAACCAA CCTGACCTAC AACAACGGCA CTAGTTTTAT CAATCGGCAG
GCCAATCAGG CAAAAAACTG GCTGGTGGGA CAAACGGTTG GCTTAAGCTC CAATTTTACC
GAAAAGCTCG ACCTGAATCT ATCGGCGAAT ATCAATCTTC AGTCGGCCAA ATACTCCTTG
CAGCCTCAGC AGAATACGAC CTTCCTGAAC CAGACGGTTA CGCTTGATGT GTACTACCAA
CTGCCGGGCC GTTTTACGCT CTCGACGGAT GTGTATTACA ATCACTACGG CGGTAACTCG
GCTAGTTTCA ATCAGTCGTT TACGCTGTGG AATGCAACAC TGGCAAAGCA GTTATTTAAA
CAGAATCAGG GGGAATTGCG GCTTCAGGTG TTCGATTTGC TGAATCAGAA CCAGAGTATT
GTCCGAAATG TGACCGATAC CTACACGGAA GAAGTCCGGA GCCGGGTGCT GAACCGCTAT
TTTATGGTAA GTTTTGTGTA TAACCTGCGG AGTTTCAGCG CGGGTGTAAC GCCACCAAGA
GACCCATTTA GTCAGCCAAC GCGCGGGCAG GGGGGAGGTT TCCGCCGGAA TGGGTAA
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| Protein sequence | MRNLLTVKQL IRLSLIVVHC TLFITLKSFA QSPGTISGQV VDSLTRKPLL EASVSLLSAK
DSSLVNFGIT DGEGRFSFPK IAEGQYRVLI TYVGYRSRAR RVVVTKTDPS PNVGAIDLVA
QSQTLTEVSV QGERAPIAVK GDTLEFNAGS FKTRPNAQVE ELLKKLPGVE VDRDGTVKAQ
GQAVTKVLVD GKPFFGNDPK MATRNLPADI IDKVQLFDQA SEQSAFSGVD DGDREKTINI
TTKKDKRKGS FGQQSIGVGP QTGDRSAGPD ARYSGRVSLN RFNNGRQISV LGMANNVNQQ
GFTAQDLGLG GNFGGAGQGQ GGGGGGGGNV VRGGQGGGNF GGQNQVGSNA ITQSWAAGIN
YRDGWGKKID VVSSYNASNT NTLTQQSSRR ENVLPGGATT RSDSSFVRNQ TNGSDNTNTN
HRVNLRLDYR LDSLTTIRLI PSLSWLNSSY SNQSDARTVN AQGALANAST TNYNSVGDGF
TGNNSLLLFR KFRKRGRTFS VNWNIALNDQ DNQGTNMSVN QFTRSNAPIS TTGTSGTATT
GQADTTGLFR QVINQRNNQQ TNSMTNSVNV SYTEPLSMRQ TLEFHYLLSN NHNTSNRAVN
DFNEATSQYD LPNTVLSNRF VNDYVTNRAG LTWQTKRLKY TYAFGLDGQQ ASLQSTNLSR
ETNLSRTFTN LLPNALLTYN FAKQRTLRFN YRTRINAPSV NQLQPVANNT NPLNIQLGNP
DLQPEYSHNI SLNFNRFEPS TFRNLFASIN ASRTDNKIVN STVFTQSGAQ TTTPINTNGY
YTVNGFLVLG QPVKIGTQKT NLNLRTNLTY NNGTSFINRQ ANQAKNWLVG QTVGLSSNFT
EKLDLNLSAN INLQSAKYSL QPQQNTTFLN QTVTLDVYYQ LPGRFTLSTD VYYNHYGGNS
ASFNQSFTLW NATLAKQLFK QNQGELRLQV FDLLNQNQSI VRNVTDTYTE EVRSRVLNRY
FMVSFVYNLR SFSAGVTPPR DPFSQPTRGQ GGGFRRNG
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