Gene Slin_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1122 
Symbol 
ID8724855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1370097 
End bp1370474 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content48% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003385972 
Protein GI284036042 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.379756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTC GAGATAAACA AGCCATCTAT CTACAGATCG CCGAACATGT GAGTGAGCAG 
ATTCTGCTGG GTCACTGGTC GGCGAACGAG AAAATTCCGT CGGTTCGTGA ACTGGCAGCG
GAACTGGAAG TAAACCCAAA TACCGTCATG AGAACCTACG AATTTTTGAA CCAGCAGGGG
GTTATTGCCA ACAAACGGGG TATTGGCTAC TTCGCTACCG ACGATGCCGT CGATAAAATT
AGAACCTACC GGCGTGAGCA GTTTTTGCAG AACGACCTGC CTTTGTTCTT TAAGAACCTA
ACCTTGTTGG GTATCGACCT CCGCGAAATT GAAACCCGTT ACGACGAATA CATAAACGCC
CCAACGAACG CGCAATGA
 
Protein sequence
MDFRDKQAIY LQIAEHVSEQ ILLGHWSANE KIPSVRELAA ELEVNPNTVM RTYEFLNQQG 
VIANKRGIGY FATDDAVDKI RTYRREQFLQ NDLPLFFKNL TLLGIDLREI ETRYDEYINA
PTNAQ