Gene Slin_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1117 
Symbol 
ID8724850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1365638 
End bp1366015 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF423 
Protein accessionYP_003385967 
Protein GI284036037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0206789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.818653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT TTATTCAATC CGGGGCCATT CTGGGCCTGT TGGGTGTTGG TCTCGGCGCG 
TTTGGGGCAC ATGCCCTGCG CACTATGCTC GATGCATCGG GCCGCACGGC TACATTCGAA
ACCGCTGTTA AGTATCAGTT TTACCACGCT TTAGCGCTCG TCCTGATTGG GTTGCTGATG
CATACGTTTG GTAGTAACCC CACGATTGTG AAGCTGCTCA ACTGGTCGGG CTATTCAATT
TTGGGCGGTG TCCTTATTTT TTCGGGCTCG CTGTATATTC TGTGCTTCAC CGGAATCACC
TGGCTGGGCG CCATAACGCC CATTGGCGGC CTCGGCATGA TTGCCGGCTG GGCACTGCTG
CTGTGGGCCT TTTTATAA
 
Protein sequence
MKFFIQSGAI LGLLGVGLGA FGAHALRTML DASGRTATFE TAVKYQFYHA LALVLIGLLM 
HTFGSNPTIV KLLNWSGYSI LGGVLIFSGS LYILCFTGIT WLGAITPIGG LGMIAGWALL
LWAFL