Gene Slin_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1096 
Symbol 
ID8724826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1339521 
End bp1340453 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content45% 
IMG OID 
Productfatty acid hydroxylase 
Protein accessionYP_003385946 
Protein GI284036016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.354603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.159739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTT CTTTATTTGG TGCCGAGAAA ATCCCCTTCG ACAGTCTACA CAACATCGAG 
AAAAACATTC CTAATATCAT TTTATGGGCT GTTCCAGTCA TGCTGTTTTT TACGGTTATT
GAAATGGCCG TTACGTATTA TCAGGAGAAA GAATTCTACG AAAAGAAAGA AACGATTGGG
TCTATTCTGG TCGGATTGGG CAATCTGGTC GTCACGGCAG CGCTGAAAGT AGGTTTGTTG
TACATGTGCA TCTGGATTTA TAACCTCATT CCCTGGCGCA TGGAGTTACA ATGGTGGACG
CTCATTCCGT GCTACATTAT TTATGATTTC TTCAGTTATT GGGCGCACCG TGTATCGCAC
GAACAACGGT TCTGGTGGGC TACACACATC GTTCACCACT CCGGTGAGCA TTATAATTTG
ACGGTATCTT ACCGACTAAG CTGGATTCAG CATTTGAAGA TTGTCTTCTT TCTGCCCGTT
GCTTTCATGG GATTTCACCC GATTATTTTC TTCGTAACCA ACCAGATTGC GGTGCTTTTC
CAGTTTTGGG TGCATACTGA ATACATCCGA CGGATGCCCG CCTGGATTGA GTACATCTTT
GCCACCCCGT CTAACCACCG GGTGCATCAT GGCTCGCAGG AAAAATACAT TGACAAGAAT
TTTGGGGCGA CATTCATTTT CTGGGATCGT ATTTTTGGCA CATTCCAGCC GGAAGAAGAA
CCGGTTATTT ACGGCGTTAC GACCAACATC ACCAACAAAG CAAATCCGTT CTTCATCAAC
TTCCACGAGC TTACCGATAT GGTCAGCGAT GTGAGACAAG CGAAGGGATT CCGTAAGAAG
TTGTTCTATA TTTTCGGTAG CCCTGTAAAA ATTGCCGAAG AGAAAAAGGA GATGGAACGG
CAACAGCTGG AGAAAGCATC CGTTGCGGCC TGA
 
Protein sequence
MPFSLFGAEK IPFDSLHNIE KNIPNIILWA VPVMLFFTVI EMAVTYYQEK EFYEKKETIG 
SILVGLGNLV VTAALKVGLL YMCIWIYNLI PWRMELQWWT LIPCYIIYDF FSYWAHRVSH
EQRFWWATHI VHHSGEHYNL TVSYRLSWIQ HLKIVFFLPV AFMGFHPIIF FVTNQIAVLF
QFWVHTEYIR RMPAWIEYIF ATPSNHRVHH GSQEKYIDKN FGATFIFWDR IFGTFQPEEE
PVIYGVTTNI TNKANPFFIN FHELTDMVSD VRQAKGFRKK LFYIFGSPVK IAEEKKEMER
QQLEKASVAA