| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1089 |
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| Symbol | |
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| ID | 8724819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1330003 |
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| End bp | 1331532 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003385939 |
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| Protein GI | 284036009 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.339374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.270172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAG GAAATATTGA GAAGCCGAAG GCAACCAGCA AACCTAATTT AAGCTTCTGG
CAAATCTGGA ATATGAGTTT CGGATTTCTA GGCATTCAAT ATGGGTTCGG ATTGCAGCAG
GCCAACATGA GCCCCATTTA CCGCTATTTG GGAGCAGATG AAGCGTCTAT TCCAGGTCTT
TGGCTTGCCG GACCACTAAC GGGTTTATTA CTTCAGCCCA TTGTTGGCGC CATTTCGGAC
AAGAGCTGGT CGCCACGCTG GGGCCGCCGT AAACCGTTTA TTCTGGCGGG GGCACTGGCG
GGTAGTATTG CCATGATTTT CATGCCTAAT TCGTCATACA TCTGGATGGC TGCCGGACTG
ATGTGGATGC TTGATGCAGG GCTAAACTCA GCGATGGAAC CGTTTCGGGC GTTTGTTGGC
GATATGCTCA ATGACAAACA ACGACCTGTT GGCTTTGCCA TACAATCGTT TATGGTTGGT
TTTGGGCAAA CCATGGCGAA TCTGATGCCC TATCTACTTC CCCTTCTGGG TATATCGATG
GTCATGTCGG AAGATCAACT CACCAATGGG ATTCCCAATT CGGTGCGCTA TCCGTTTTAC
ATTGGTGCAG CGGCTATTCT GATCTCGGTG TTCTGGACAA TTCGCACGAC GAAAGAATAC
CCACCCGTCA ACGACAAGTA CAAAGAACCA CACGTTTTTA CGGATGAAGA AAAAAAGTCC
ATTTCGTTCT GGCACCTGGC GTTAGCCTTG GGAGGAGCTA TTCTGGCCTT CTTTTTTGCG
GCACGAATTG GCGGTTTGGT AACGGGCGCA CTCTGGGGAC TGGGTGTATT TGTGGGTAGC
TACCTGTTGC TGATGCTGCC TATTTTCAAA GAAATACTGG CTTCACTTTC AGCCATGCCA
ACTGTTATGA AGCAGCTGTG GTGGGTTAAA TTTTTCACCT GGTACGGGCT ACCACTCATG
TGGCAGTACT TATCGCTGGC AGTGGCCAGG CACGCATTCA ACGCTCCAGA TGCAGTGTCT
AATAAAATTG GTTTTGAAGA GGGTACCAAA TGGGGCGGCC TCTGCTTTGC TATGTTCAGC
ATCTCCTGTG CCGTTATTTC ATTCTTTATT CCTCGAATTG CCAAGGCCCT CGGTAGTGCG
CGGCTTACCC ATGCACTATT CCTCACGATT GGGGCAATGG GCTTCTTCCT GACACTTACC
TCTACGGATA AGTTGGTATA CCTTGTTGGC ATGATGATTA TCGGTTTTGC CTGGGGGTCC
ATTATGTCGA TGCCTTATCT GATGCTGGCA AGTGCTGTTC CCAAAGAACG TATGGGCGTT
TATATGGGCA TTTTCAATGG CTTTATCTGT GTGCCGCAGT TTATTGGTAT GCTTACGGTT
CCGCTTTATT ACAAACCCAT CTTGGGCGAC GATCCGCGCA ATGCACTGGT GTTAGCCGGT
ATCTGTCTGC TGTTAGCGGC AGCATCCTGT TTTCTGGTAA AAGAAATCAA AGCGACCGAC
GAAGCCACCA TTCCTGTCGA ACTTGGTTAA
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| Protein sequence | MQTGNIEKPK ATSKPNLSFW QIWNMSFGFL GIQYGFGLQQ ANMSPIYRYL GADEASIPGL
WLAGPLTGLL LQPIVGAISD KSWSPRWGRR KPFILAGALA GSIAMIFMPN SSYIWMAAGL
MWMLDAGLNS AMEPFRAFVG DMLNDKQRPV GFAIQSFMVG FGQTMANLMP YLLPLLGISM
VMSEDQLTNG IPNSVRYPFY IGAAAILISV FWTIRTTKEY PPVNDKYKEP HVFTDEEKKS
ISFWHLALAL GGAILAFFFA ARIGGLVTGA LWGLGVFVGS YLLLMLPIFK EILASLSAMP
TVMKQLWWVK FFTWYGLPLM WQYLSLAVAR HAFNAPDAVS NKIGFEEGTK WGGLCFAMFS
ISCAVISFFI PRIAKALGSA RLTHALFLTI GAMGFFLTLT STDKLVYLVG MMIIGFAWGS
IMSMPYLMLA SAVPKERMGV YMGIFNGFIC VPQFIGMLTV PLYYKPILGD DPRNALVLAG
ICLLLAAASC FLVKEIKATD EATIPVELG
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