Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1088 |
Symbol | |
ID | 8724818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1328933 |
End bp | 1329880 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | PfkB domain protein |
Protein accession | YP_003385938 |
Protein GI | 284036008 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.332998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.446333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATCC CACCCCGCCC CTACGCCCTT CTATCGGTCG GCGAACTCCT GGCTGACCTG ATTGGCCACC ATGTTTCGAA CAGTTTACTG GATGCCCAGG ATTTTCGTCG GTATCAGGGC GGCAGTCCGG CCAATATGGC TACTAACATG GCCCGATTAG GCAATCCGAC CGCGCTGGTT TCCTGCGTTG GCAACGACAA CATTGGGCGC TACCTAACCC GACAGATTGA AGAGTCGGGG GTGGATACCC AATTTATCAC CTACGACCCG CTGGCACCCA CCAGCATTGT ACTTGTTTCC CGAACGGCCG GCACGCCCGA TTTTGTGGCT TACCGTCATG CAGACTGCCG CATTCGACCC GAACAGCTAC CCGATTCGCT GCTTGCGCAG GCCCAGCTAT TTCACACAAC CTGCTTCGCC CTGAGCCAGC AACCGGCACA GGACGCTATC GTTGATGCCG CCAAACGCGC CAAAGCTGCC GGTTGCCAGG TAACCATCGA CACAAACTAT GCCCCCAGCA TCTGGCCCGA TCGTGATCAG GCATGGCAGG TCATCAGTGA TTACTGTTCA GCCGGTGCTT TGGTAAAAAT CAGTGAAGAC GATGCAGAAC GGCTGTACGG TAGCCCTCAA ACGCCAGATC GTATACTAGC CGATTTCCAT AAAATGGGCG CTGTCCTGAT CTGCCTGACA CTCGGCCCCA ACGGTAGTCT GGTTTCGTAC GATGGCGGTG CCAAGCAATC GCGGATACCG GGCAAGAAAA TTGACGTTGT CGACGTTACC GGTGCAGGCG ATGCCTACTG GGCAGGCTTT TTAACCGCTT ATCTGGATGG GTATGCACCG GGAAACTGTG CCCACGCGGG TGCAGCCCTG GCCAAGATGA AGCTCACTCG ACAAGGGCCT TTACCCGATA AAGTTGACCG TAAGCTACTT TACGATCAAT TCGAATAA
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Protein sequence | MTIPPRPYAL LSVGELLADL IGHHVSNSLL DAQDFRRYQG GSPANMATNM ARLGNPTALV SCVGNDNIGR YLTRQIEESG VDTQFITYDP LAPTSIVLVS RTAGTPDFVA YRHADCRIRP EQLPDSLLAQ AQLFHTTCFA LSQQPAQDAI VDAAKRAKAA GCQVTIDTNY APSIWPDRDQ AWQVISDYCS AGALVKISED DAERLYGSPQ TPDRILADFH KMGAVLICLT LGPNGSLVSY DGGAKQSRIP GKKIDVVDVT GAGDAYWAGF LTAYLDGYAP GNCAHAGAAL AKMKLTRQGP LPDKVDRKLL YDQFE
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