Gene Slin_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1079 
Symbol 
ID8724809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1317917 
End bp1318801 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content50% 
IMG OID 
ProductNmrA family protein 
Protein accessionYP_003385929 
Protein GI284035999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.153764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCG AACGCATACT CATTACCGGA GCTACCGGCA ATGTAGGTCT GGCAACACTG 
GCCGACCTGA TAAAACACCC GGATAAACAA AAGTTTACGG TCATAGCCGG ATTACGGTCG
CCAGGTCAGT CAACGGAAAG CTCGGGCCTT GAAGCTGACG AAACCGTTTG CCTAGACTTC
GAAAATCCGG CCACGTTCGA TGCTGCGCTG GCGGGTGTGA GTCGCATTTT ACTGGTTCGT
CCCCCGCAGC TGGCCGACGT TGATAAATAC TTTAAGCCGT TTATCGACGC TATGCAACGC
GCTAACGTCA GACAAGTGGT CTTTCTATCG CTGCAAGGCG TAGAAAACAA CCCGGTGACA
CCCCACCATA AAATTGAGAA GCTGATTCGG GAAGCGGGAT TGCCGTATAC ATTCTTACGA
CCGAGCTTTT TCATGCAGAA TTTAAGCACA ACGCATCGGG ACGAAATACG ACTTCGGGAT
GAGATTTTCG TACCTGCCGG TCATGGCCGA ACCAGTTTTA TTGATGTGCG GGATATCAGC
GCTATTGCCG CTTTGGTATT AACGGGTGGG CCGGAGGAAT TTATAAATCA GGGGTACGAG
CTAACCGGCT CCGAAGCGTT AACGTATACC GAAATAGCGC AGATTTTAAC GGACGTTCTT
GGCAGAAAAA TAACGTACCG TAACCCATCG ATTCTGCGCT TTATCTGGCA GAAGTGGCAG
AAGGAGAAGC TACCCCTTGG CTTTATCTTG ATTATGACAG CCCTCTATAC CGTATCGAAG
TTAGGGAAGG CGGCAGGGCT CACGTCCGAA ACTGAACGGT TGCTGAAACG TCAGCCAATA
CCCTTCCGGC AATTTGCCCG TGATTTCCGT AATGTATGGA ACTAG
 
Protein sequence
MTTERILITG ATGNVGLATL ADLIKHPDKQ KFTVIAGLRS PGQSTESSGL EADETVCLDF 
ENPATFDAAL AGVSRILLVR PPQLADVDKY FKPFIDAMQR ANVRQVVFLS LQGVENNPVT
PHHKIEKLIR EAGLPYTFLR PSFFMQNLST THRDEIRLRD EIFVPAGHGR TSFIDVRDIS
AIAALVLTGG PEEFINQGYE LTGSEALTYT EIAQILTDVL GRKITYRNPS ILRFIWQKWQ
KEKLPLGFIL IMTALYTVSK LGKAAGLTSE TERLLKRQPI PFRQFARDFR NVWN