Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1069 |
Symbol | |
ID | 8724799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1305270 |
End bp | 1306397 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Mannonate dehydratase |
Protein accession | YP_003385919 |
Protein GI | 284035989 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTA AAAGCTTTAT TAAAACCCTG ACGGCTGGTT CTGTGGGCGC TGCCACATTC GGTGCCGAGT CGGTAACGGC TGGGCATGTG GGTCAAAAAA CAGAACGTCC AAAGAAGGTC TTGATGAAAG TAGGCTGCCA GTCAGGCGGT ACGACCATCG AAAATCTGGA GTTCAAAGCC CGCCATGGAG TATTTAACAT CGACGGCGGG GCACCCAAAA CCATTGCCGG AAAAGGCTGG GACCTCGATG ATTCTATGCG GAAGCGGGAC GCCTGCGAGA AATACGGCAT CAGCCTCGAC GCCTATCATT TTCCACTGGC TTCTTCGGGC ATCGACAAGG CCGAGTACCC CAACATTATG CTGGGCAAAA GCCCCGAGCG GGATCGTGAA ATCGAGATTC TCCAGCAGAT GATTCAGGTG GCCGGAAAGA CGGGCATCAA GGTATTAAAT TACAATACCA CCATACTACC GGTACTACGC ACGGGCAAAA CGGTCGACCC AAAGCGGGGT AATGCCATTT ATAGCACCTG GAATTACGAA GAAGCCCTGA AGCAAAATGC ACCCAAAACC GTAGCCGGTG ACGTATCCAT CGAGCAGATG TTCGAGCGCA TCACCTACCT CCTGGACCGC CTTCTGCCGG TAGCCAAAGA ATACAAGGTC AAGCTTGCCA ACCACATTGC CGATCCGCCA ACGCCCATTG GCTACCGGGG CATTAGCCGA TGGAACAGCC CCGACGTATT CAAAGGGATT CAGCGGTTTG CGAAGCTGTA CGACAGCGAG TACCACGGCT TCAATTTCTG CATCGGCTCC ATTGCCGAAG GGCTGAAAGA CCCGAAAACC GAAATTATGC CGATCATTAA ATGGGTGGGC GAGCGAAATC AGATTTTCAA CGTTCATTTG CGGAACATCA AGGGCGGCTG GAATAACTTT CAGGAGGTTT ACCCCGATAA CGGCGACATG AATTTCCTGC ACGTTGTTCG TGCCCTGCGC GATGTGGGCT ACTCCGGCAT GGTCATGCCC GACCACGTGC CGCACCACGC CGACGCAGCC GCCGATTTAC AGGCTTTCTC CTTCTGTTAC GGCTACATCA AAGGGCTTTT ACAAACCGTC ACCGACGAAG CAATCTAA
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Protein sequence | MKRKSFIKTL TAGSVGAATF GAESVTAGHV GQKTERPKKV LMKVGCQSGG TTIENLEFKA RHGVFNIDGG APKTIAGKGW DLDDSMRKRD ACEKYGISLD AYHFPLASSG IDKAEYPNIM LGKSPERDRE IEILQQMIQV AGKTGIKVLN YNTTILPVLR TGKTVDPKRG NAIYSTWNYE EALKQNAPKT VAGDVSIEQM FERITYLLDR LLPVAKEYKV KLANHIADPP TPIGYRGISR WNSPDVFKGI QRFAKLYDSE YHGFNFCIGS IAEGLKDPKT EIMPIIKWVG ERNQIFNVHL RNIKGGWNNF QEVYPDNGDM NFLHVVRALR DVGYSGMVMP DHVPHHADAA ADLQAFSFCY GYIKGLLQTV TDEAI
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