Gene Slin_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1061 
Symbol 
ID8724791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1296387 
End bp1297238 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content58% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003385911 
Protein GI284035981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.39643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACA CGTTTGTCGA AATCAATAGT ACCTCGCCGG TTCGGTTGCA TGTGATGCAG 
GCCGGACCGG ACGATGGCCC GCTCATTATT CTGTTGCACG GCTTCCCGGA GTTCTGGTAT
GGCTGGAAAA ATCAGATTGA TGCGCTGGCC GAAGCGGGTT ACTGCGTCTG GGCACCCGAC
CAGCGCGGAT ATAATCTGAG CGCCAAACCA AAAGGTATCG ATGCCTATGG TCTTGACACC
TTAGTGGCGG ATGTAATTGG TCTGATTGAT GCGTCCGGAC GGCAGAAAGC GGTAGTGGTC
GGGCACGATT GGGGAGCGGC CGTAGCCTGG TGGACGGCTG TTTCGCATCC CGAACGCGTC
GAACGGCTGG TGGTGTTGAA TGTGCCGCAC CCTGTTGTGA TGAAGAACTA CGCCAGTAGT
AACCTCGGTC AAATGATGCG GAGCTGGTAC ATCGGCTTTT TTCAACTGCC CTGGCTACCC
GAAGCCGTAT CGAGCGCCGG AAACTGGTCT ATGTTTGTGC GAACATTGCT TGGCAGCAGT
CGGCCGGGGA CGTTCCGGCG GGCCGATTTG CAGCAGTACA AAGCGGCCTG GTCGCAGCCG
GGAGCCGTTA CGGCCATGAT CAACTGGTAC CGGGCCTCGC TCCGCAAACC ACCCGCCCCT
CGTGCATCCG TCCGGGTTAC CGTCCCGACC TTACTCATCT GGGGTACGCG CGACAAGTTC
CTCAAGCGGG AAATGGCCCA ACCCAGCATC GACCTCTGCG ATAACGGCCG ACTGGTCTTC
TTCGAAAATG CCTCCCACTG GGTCCAGCAC GAAGAAGCCG AACGGGTGAA TGAATTGATA
CTTAGTCGGT AA
 
Protein sequence
MTHTFVEINS TSPVRLHVMQ AGPDDGPLII LLHGFPEFWY GWKNQIDALA EAGYCVWAPD 
QRGYNLSAKP KGIDAYGLDT LVADVIGLID ASGRQKAVVV GHDWGAAVAW WTAVSHPERV
ERLVVLNVPH PVVMKNYASS NLGQMMRSWY IGFFQLPWLP EAVSSAGNWS MFVRTLLGSS
RPGTFRRADL QQYKAAWSQP GAVTAMINWY RASLRKPPAP RASVRVTVPT LLIWGTRDKF
LKREMAQPSI DLCDNGRLVF FENASHWVQH EEAERVNELI LSR