| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1059 |
|---|
| Symbol | |
|---|
| ID | 8724789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1293690 |
|---|
| End bp | 1294889 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | mannonate dehydratase |
|---|
| Protein accession | YP_003385909 |
|---|
| Protein GI | 284035979 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.568078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAC AAACCTGGCG ATGGTTCGGT CCGAATGACC CCGTATCCCT CAATGATGTC
CGACAGGCCG GTGCTACCGG TATCGTAACC GCCCTGCACC AGATTTCGAA TGGAAAAGTA
TGGTCACTAG AAGACATTCT GGACCGCAAA GCGATTATCG AAGAAAAGGG TCTGACGTGG
TCGGTCGTTG AAAGTATTCC GGTACATGAG GGGATCAAAA CTCGCACCGG CGACTATCGG
CAATACATCG AAAACTACAA GGAGTCTATC GTCAATCTGG CAAAGGCAGG AATCGACACG
GTCTGCTATA ACTTCATGCC CGTACTCGAC TGGACCCGCA CCGACCTTGA CTTTCCCATG
CCCGATGGCT CAACGGGGCT TCGTTTCGAC GCCATTGCGT TCGCGGCTTT CGAACTATTC
ATTCTTCAGC GGCCCGGCGC TCAGTATTTA TATAATGATG AGCAGAAGCA ACAGGCCCGA
ACCAAACTCG ACAGCATGTC CGATGCTCAG GTGAAGCGGC TGGTTCGTAC CATCATCGCC
GGACTGCCCG GTTCGGAAGA GAGCTACACC GTCGAGCAGT TCCGCGATGC ACTCGATGTC
TATAAAGACA TTAGCGACCA AGATTTGCGC CAGAACCTGT ATTCCTTTCT GCGCGAGATT
GTACCCGTGG CTGAATCGGC TGGCGTCCGG CTGGCCATTC ACCCCGACGA TCCGCCGTAC
CCAATTCTAG GACTGCCCCG CGTGGTGAGT ACTGAAGCCG ACGCGCGCGC GTTGCTGGCC
GCTACCGACT CACCCGCCAA CGGACTTTGC TTTTGCACCG GCTCGTACGG CGTCCGGGCC
GATAACGACC TCGTCGGGAT GGTTGAGCGG CTGGGGCCGA GCATTCATTT CGTTCACCTG
CGCAGCACCC AGCGTGATGC GGATAATCAG CCCGGCCGGC ATAGTTTTCA GGAAGCCAAT
CACCTCGAAG GCGATGTGCC AATGGTGGGC GTAACGCGGG CGCTACTGGC CGAACAGAAA
CGGCGTGCTG TAGAAGGGCG GCAAGACACC CGTATGCCCT TCCGCCCCGA CCACGGCCAC
CGGATGCTCG ATGATCTGAC CTCCGGGAAG CGAACGAATC CGGGCTATAC TGCCATTGGC
CGTTTGCGCG GACTGGCTGA GATTCGGGGG CTTATGCTTG GGTTATCGGC GGAAGAGTAA
|
|---|
| Protein sequence | MLEQTWRWFG PNDPVSLNDV RQAGATGIVT ALHQISNGKV WSLEDILDRK AIIEEKGLTW
SVVESIPVHE GIKTRTGDYR QYIENYKESI VNLAKAGIDT VCYNFMPVLD WTRTDLDFPM
PDGSTGLRFD AIAFAAFELF ILQRPGAQYL YNDEQKQQAR TKLDSMSDAQ VKRLVRTIIA
GLPGSEESYT VEQFRDALDV YKDISDQDLR QNLYSFLREI VPVAESAGVR LAIHPDDPPY
PILGLPRVVS TEADARALLA ATDSPANGLC FCTGSYGVRA DNDLVGMVER LGPSIHFVHL
RSTQRDADNQ PGRHSFQEAN HLEGDVPMVG VTRALLAEQK RRAVEGRQDT RMPFRPDHGH
RMLDDLTSGK RTNPGYTAIG RLRGLAEIRG LMLGLSAEE
|
|---|
| |