Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1056 |
Symbol | |
ID | 8724786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1289469 |
End bp | 1291010 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Mannitol dehydrogenase domain protein |
Protein accession | YP_003385906 |
Protein GI | 284035976 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.946313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.945068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAG ACCGGATTGC AGCACGTCCA ACCATGGCTA AATTAACCCG TTCAACCCAT CCAGTACCTG TTTACCCTGA AAAAATCCTT CAATTTGGTA CGGGTGTACT TCTGCGAGGC TTACCTGATT ATTTAATACA AAAGGCGAAT AGCGAAGGAA AATTCGAAGG TTCCATCGTT GTCGTTAAGT CGACCGATAG CCAGACGAAT GAGTTCTCGG ATCAGGATAA CCTTTATACG GTTGCTGTTC GGGGTGTTCA ACAGGGGCAG GAAGTAGTCG AAAATACCAT TGTTTCGGCG ATTAGCCGGG TGCTGGCGGC TCAAACCCAG TGGAACGATG TGCTGGTTCT GGCTCGTAAT CCAAAGCTAC AGATCATCAT TTCCAATACC ACCGAAATTG GCCTCAACTA CGTCGAAGAA AGTATTTTTC AACATCCGCC CCAGTCGTTT CCGGCTAAAC TAACGGCCTT TCTGTACGAA CGGTTTCGCA GTGTAGGCGG TTCGAAAGCA AAGGGACTGG TTGTTATCCC AACGGAACTG GTTACCGATA ACGGATTGAA ATTGCGGGAA GCTGTTGAAA AACTGGCTCA GTTCAACGAG TTGGGCAAGC TCTTCACCAA ATGGCTCAAA TTCCACGTTC GGTTCTGTAA CTCCCTCGTC GACCGGATCG TTACGCGCCC CACGGAGGAA GACAAACTGG CTCTTGAAAA TGAAGCAGGC TACGAAGACG ATCTGCTCAC CTTCACGGAG CCCTACCACC TCTGGGCCAT TGAAGGCGAC GATCGTGTAA AGCAAACATT GTCGTTTGCT GGTCCGTCCA CACCACAGAT CATCATTGAC GAAGACATCA ATTTTTATAA AGAGCGAAAG CTTCGGGTGT TGAACGGTAC GCACACGCTA ACCATGCCCC TGGGTTATCT GCTCGGGCTG GAAACGGTAG CGGACGAAAT GCGCCACCCG GCCATGAGCA AATTCGTTGA GCAACTGATG CTCAACGAAA TCGTGCCCAC CGTGCCCGAT TACGACATTC CGGGGATGGA CAAAGCCGCC GTTGCTCAGT TCGCCCATGA CGTTTTAGAT CGGTTCCGCA ATCCTCATCT GGACCATCTG CTACTGAATA TTTCGCTTCA GCAGACGGCT AAAATGCAGG CCCGAAATGT AGCTACGCTG CAACGTTATT ATGAGCAGTT CAACACCGCG CCCAAGCTCA TGGCCTTCGG ATTTGCGGCT TATTTGCTAT TCATGAAAGC TACTCGGGAA GAGAACGGGC AGTTCTTCGG CGAAATCCCC CTGTCAGGTG GCGGTATCCT TAACTACCCG GTTCGGGATG ACAAAGCCGG GTATTTTTAT GGCGACTGGA AAACGGTGAA AGAAGGTGAT GCCGCCACGG TCGACGCCTT TGTGAAGAGT GTCTTGTCTG ATACAACGCT CTGGCAGGCA GATCTGACCG CATTACCCGG TTTTAGCGAA GCCGTTGCCG AAAACCTGAA CGCGTTACTC ACGGAAGGTG TCGAAAAGAG CCTCGAAAAA GTGATTGCCT AG
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Protein sequence | MTADRIAARP TMAKLTRSTH PVPVYPEKIL QFGTGVLLRG LPDYLIQKAN SEGKFEGSIV VVKSTDSQTN EFSDQDNLYT VAVRGVQQGQ EVVENTIVSA ISRVLAAQTQ WNDVLVLARN PKLQIIISNT TEIGLNYVEE SIFQHPPQSF PAKLTAFLYE RFRSVGGSKA KGLVVIPTEL VTDNGLKLRE AVEKLAQFNE LGKLFTKWLK FHVRFCNSLV DRIVTRPTEE DKLALENEAG YEDDLLTFTE PYHLWAIEGD DRVKQTLSFA GPSTPQIIID EDINFYKERK LRVLNGTHTL TMPLGYLLGL ETVADEMRHP AMSKFVEQLM LNEIVPTVPD YDIPGMDKAA VAQFAHDVLD RFRNPHLDHL LLNISLQQTA KMQARNVATL QRYYEQFNTA PKLMAFGFAA YLLFMKATRE ENGQFFGEIP LSGGGILNYP VRDDKAGYFY GDWKTVKEGD AATVDAFVKS VLSDTTLWQA DLTALPGFSE AVAENLNALL TEGVEKSLEK VIA
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