Gene Slin_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1050 
Symbol 
ID8724780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1284473 
End bp1285240 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content52% 
IMG OID 
Productbeta-lactamase domain protein 
Protein accessionYP_003385900 
Protein GI284035970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTGT TCATCACCTC ATTAAATTCG GGCAGCAACG GGAATTGTTA TTACGTTGGC 
AATGAGCGGG AAGCTGTTCT GATCGACGCC GGGATCTCCT GCCGGGAAAC CGAACGACGA
ATGGAGCGGC TTGGCTTATC TCTGCAAACC GTTAAAGCCA TCTTTGTTTC TCACGAACAC
AGCGACCATA TCCGGGGCAT TCCCCAACTG GCCAAAAAGC ACCAGATTCC TGTTTTTATC
ACCCCCGGCA CCCTGAATAA TTCGGGCTTA CCGCAAACCG GCTTTCCACT TCGTCCGCTG
CGCGCGTATG AGCCGGTCTG GATTGGTGAA CTATGCATTA CGGCTTTTCC CAAGCACCAC
GATGCCAGCG ACCCGCACAG TTTTCTGGTC GCTGGCCGAG ATACGAAAGT AGGTGTGTTC
ACCGATATTG GTGCCCCCTG CGAACACCTG ATCCATCACT TTAAGCAATG CCACGCGGCT
TTTCTGGAAG CGAATTACGA TGAGGATATG CTGGAGAAAG GGCGGTACCC GTATTTCCTG
AAGAATAGAA TCCGGGGAGG TAAAGGGCAC CTTTCCAACC AGCAGGCGCT GGACCTGTTT
AAAACGCATA AACCGGCCTT TATGAGCCAC GTGCTGTTGT CGCACCTCTC GAAAGACAAT
AACTGTCCTC AACTCACGAA GGATTTGTTC AGCCTGCACC GGGACACGAC AGAGGTTATC
GTAGCCTCCC GTTTCGAAGA AACACCCGTC TACGCCGTTT GCGCGTAA
 
Protein sequence
MQLFITSLNS GSNGNCYYVG NEREAVLIDA GISCRETERR MERLGLSLQT VKAIFVSHEH 
SDHIRGIPQL AKKHQIPVFI TPGTLNNSGL PQTGFPLRPL RAYEPVWIGE LCITAFPKHH
DASDPHSFLV AGRDTKVGVF TDIGAPCEHL IHHFKQCHAA FLEANYDEDM LEKGRYPYFL
KNRIRGGKGH LSNQQALDLF KTHKPAFMSH VLLSHLSKDN NCPQLTKDLF SLHRDTTEVI
VASRFEETPV YAVCA