Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1047 |
Symbol | |
ID | 8724777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1280895 |
End bp | 1281848 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_003385897 |
Protein GI | 284035967 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACATC TTTCACTAAC TCCTATCACC ACTACCCTAT CCATCTTCCT TTTGCTCGCC AGCTGTAATC AATCGGGCAC GTCCGAAACC AGCCAGGACG GCGAAGGCAA AAAACTGGTG GTGGGTGCCA CCATGCTGAG TATGCAGAAT GAGTTTATCG TGAATGTGCA CGACGAGATG GACAAAGAAG CACAAAAGGC CGGCATTGAG TTGATTACCG TCGATGCAGA ACGGTCGGCG CTGAAGCAGG TGGAGCAGGT AGAAAGCTTC ATCGCCCAGA AAGTCGATGC CATTATCATG AATCCGTGCG AAGTGGAGGC CAGTTCACCA GCCGTTGCCA AAGCCCTGGC CGCCAAAATC CCGATCATCA ACGTTAACTC CGAAACAAGT TCGAAGCCCT CGGCTTTCGT GGGTTCGGAT GATGTCGAAT CGGCCCGAAT CGCCATGAAA TTTATCGCTG ACAAGCTGGG TGGCAAAGGC AATGTGGTTA TGATGCACGG CTATATGGGT CAGGCGGCCC AGATCAAGCG GGAACAGGGC GCGCGGGAAA TCCTGAAGCA GTACCCGAAC CTGAAACTGC TGGCTCACCA AACAGGCGAA TGGGACCGCG CCAAGGCCAT GTCGCTGATG GAAAACTGGA TTCAGTCGTA CGGTTCGCAG ATCAACGCCG TCTTCGCGCA TAATGACGAG ATGGGCCTTG GTGCCGTAAA AGCCCTGACC GACGCGGGCC TTAAAGACAA AGTAATTGTG GTGAGTATCG ACGCTATTCC GGATGCGTTG CAGGCCGTCA AGAAAGGCTC GCTGGATGCT ACAGTTTTCC AGAATGCCGA GCAGCAGGGC GCAAAAGCCA TCGCAACAGC CATTAAAGCC GCCAAAGGGC AACCATTTGA CAAAGAAACA CTTGTACCCT TTCAGTTGGT CACCAAAGAT AACCTGAGTA AGTTTTTGAA GTAA
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Protein sequence | MRHLSLTPIT TTLSIFLLLA SCNQSGTSET SQDGEGKKLV VGATMLSMQN EFIVNVHDEM DKEAQKAGIE LITVDAERSA LKQVEQVESF IAQKVDAIIM NPCEVEASSP AVAKALAAKI PIINVNSETS SKPSAFVGSD DVESARIAMK FIADKLGGKG NVVMMHGYMG QAAQIKREQG AREILKQYPN LKLLAHQTGE WDRAKAMSLM ENWIQSYGSQ INAVFAHNDE MGLGAVKALT DAGLKDKVIV VSIDAIPDAL QAVKKGSLDA TVFQNAEQQG AKAIATAIKA AKGQPFDKET LVPFQLVTKD NLSKFLK
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