| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1025 |
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| Symbol | |
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| ID | 8724755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1244291 |
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| End bp | 1246012 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | choline dehydrogenase |
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| Protein accession | YP_003385875 |
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| Protein GI | 284035945 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAATT TAGCAGTAGA TAGCCAGAAA GCCCGCACCT ACGATGCCAT TGTGATTGGC
TCTGGTATGA GTGGCGGCTG GGCAGCAAAG GAACTTACCG AACACGGTCT GCATACGCTT
TTACTGGAGC GAGGCAGAGA CGTTAAACAC GTTACCGACT ACCCTACTGC CATGCTGAAT
CCCTGGGACA TGGAGCACCG GGGGCAGGTT CCGCTCGCCA GTCGGCAGGA GTACTCCATC
GCCAGCCGTA ATTATGCCTT TCGGGAAGAT ACCCGCCACT TTTTCGCTAA AGACAGCGAC
CAGCCCTACA TTCAGGAAAA GCCTTTCGAC TGGATTCACG GGTATCAGGT GGGTGGCCGT
TCGCTGCTTT GGGGACGGCA AACCCAGCGC TGGAGTGATT TCGATTTTAC CGGGCCAGCC
CGCGATGGCT TTGCAGTAGA CTGGCCCATT CGCTACGCTG ATTTGGCCCC ATGGTATAGC
CACGTCGAAA AATTTGCGGG CATTTCGGGT AATAAAGACG GACTGGCGAC CCTACCGGAT
GGTGAATTTC TGGCTCCGCA CGAGATGTCG TGCGTGGAGA CTCATTTCAA AAAACAAGTG
GCGGCTCACT ATCCGGATCG ACACGTGATC ATCGGCCGGG CGGCTCACCT GACAACGCCC
CGGAACATTC ATTTTCGGCA GGGGCGCGCG CAGTGTCAGC ACCGGACGTT ATGCGAACGC
GGCTGTCCTT ACGGTGGCTA TTACAGCAGC AATGCCTCCA CCATTCCGTG GGCGCTGCGA
ACGGGAAAGC TAACCTTACA GCCCAACTCG GTGGTGCACT CCATTATTTA TGATGATAAT
AAACCAGGGG GAGGCAAGGC AACGGGCGTG CGGGTCATCG ACACCAACAC CCTGCAAATG
ACGGAGTACC ACGCCCGTAT CATTTTCGTG AATGCATCAG CACTTCATAC GAATCTTATC
TTACTCAACT CAACCTCCAA CCGGTTCCCA AATGGGCTGG GTAATGATAG TGGCCTATTG
GGTACGCACA TGGCGTTTCA CAGTTACCGG GGTCGTATGT CGGGCACCTA CGAAGGGTTA
AACGCATTCA CGACCGACGG ACGCCGACCC AACAGCAGTT ACATTCCGCG ATTCAGAAAT
GTTTACAAAC AGGAAACGGA TTTTCTGCGT GGATATGCCG CCACCTTCTA TGCGTCGAGA
GAACCGATCC AAAACCAGGA TGGCCTCGGT GCGTCACTGA AACAGCGTTT ACTCGATCCA
ACGCCGGGCG ACTGGCAGGT GGGTTCTGCC ATGATGGCCG AAACCATCCC TAAAGCCGAA
AGCACCGTGC GGCTGGACCC TACCCTGAAA GACAACTTCG GAATTCCGCA ACTCCGGGTA
TCGGTAGGCT ACGATGCCAA CGACGAAAAA ATTCTGAAGG ACTACTTCGA ACAACTGACC
GAAATGTTCA CCCTGGCCGG ATTTAAAAAC ATCCGCACCC AGGACACCGG TCGACTACCC
GGCAGCGAAA ACCACGAGAT GGGGGGCGTT CGTATGGGAC ATGACCCCAA AACATCGTTG
TTGAACCGCT GGAACCAGCT TCACCACTGC AAAAACGTTT TCGTTACTGA TGGAGCCTGC
ATGACCTCCA CCAGCACCCA AAACCCGTCT CTTACCTACA TGGCCCTCAG TGCAAGGGCT
GCCAACTACG CCGTGAAACA AATGAAAGCG GGGACGCTGT AA
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| Protein sequence | MVNLAVDSQK ARTYDAIVIG SGMSGGWAAK ELTEHGLHTL LLERGRDVKH VTDYPTAMLN
PWDMEHRGQV PLASRQEYSI ASRNYAFRED TRHFFAKDSD QPYIQEKPFD WIHGYQVGGR
SLLWGRQTQR WSDFDFTGPA RDGFAVDWPI RYADLAPWYS HVEKFAGISG NKDGLATLPD
GEFLAPHEMS CVETHFKKQV AAHYPDRHVI IGRAAHLTTP RNIHFRQGRA QCQHRTLCER
GCPYGGYYSS NASTIPWALR TGKLTLQPNS VVHSIIYDDN KPGGGKATGV RVIDTNTLQM
TEYHARIIFV NASALHTNLI LLNSTSNRFP NGLGNDSGLL GTHMAFHSYR GRMSGTYEGL
NAFTTDGRRP NSSYIPRFRN VYKQETDFLR GYAATFYASR EPIQNQDGLG ASLKQRLLDP
TPGDWQVGSA MMAETIPKAE STVRLDPTLK DNFGIPQLRV SVGYDANDEK ILKDYFEQLT
EMFTLAGFKN IRTQDTGRLP GSENHEMGGV RMGHDPKTSL LNRWNQLHHC KNVFVTDGAC
MTSTSTQNPS LTYMALSARA ANYAVKQMKA GTL
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