| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1024 |
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| Symbol | |
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| ID | 8724754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1242306 |
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| End bp | 1244240 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003385874 |
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| Protein GI | 284035944 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTA GTCTTTTGGG CAGTCTGTTA CTTGTCGGCT ACGCAACGCT GGCGCAGCCG
ACGGTTAACA AAGCCGCGCG CGATACCCCC TGGTCACAAC GAATGGTGGC TACGATCATG
GCGAATAATG CCGATTCCAT TGCTTATGTC AGGGAAGGTA AAGACGCGCG CTGGGAGTAT
GAAATGGGGG TGCTTCTCGA AGCTGTGGAA CAGGTCTGGT ACCGCACGGC TGATGATCGG
TATTTTCAGT ACATCCAGAA AAATATGGAC CGGTATGTAA ACGCCGACGG CGACATCCGA
ACCTATAAAA TGGACGATTA CAATATTGAT TTTGTAACCC CCGGCCGGGC TTTGCTTCTG
CTTGCGCAAC AATCGCTGCC GGGCAATGCA AAATACCGGA AAGCCGCTGA GGTGCTCCGG
AAGCAGCTTG CTCAACAGCC GCGTACGAAG GAAGGCGGCT TCTGGCACAA AAAGCGCTAT
CCGTATCAGA TGTGGCTCGA TGGCCTCTAC ATGGCCGAGC CGTTCTATGC GGAGTACACC
CGCCTGTATG GCGATGAAAA GAACTTTGAT GATATCGTCA ACCAGTTTGT GTGGATGGAC
AACCACGCCC GCGACGAAAA AACGGGTTTG CTCTATCATG GCTGGGACGA AAGCCGGGAG
CAGAAATGGG CCAACAAGCA AACGGGCAAG TCGCCCAACT TCTGGAGCCG TTCTATAGGC
TGGTACGTAA TGGCGCTCGT CGACGCGCTC GACTATGTAC CGCAGTCGCA CCCGCGCCGG
GGTGAACTGG TGGCGATATT GCAGCGTGTA ATGCCTGCCA TCGTAAAATA CCAGGACCCA
AAAACTGGCT GCTGGTATCA GGTGACCGAC CGGCTTGGCG ATAAAGGAAA CTACATCGAA
GCATCAGGAA CGTCGATGTT TGTGTATGCG CTGGCCAAAG GTGTTCGGAT GGGGTATCTG
CCAGCATCGC TGGCGGCACC GGCTCAAAAG GGGTATGCCG GTATTCTGAA AAACTTTATC
ACAACCGATG CCCAGGGCCA GATTCACCTC GAAAAGACAG TTCTGGTAAG CGGCCTTGGC
GGGAATCCGT ACCGCGACGG GAGCTATGAA TATTATCTGA GTGAGCCACT GCGTCAGGAT
GATTTGAAAG GCGTTGGTCC GTTCATTATG GCCAGCGTGG AAATGGAAAT AGCCGCTGAG
CGAGGCATCG CCAAAGGGAA AACCGTGGCC GTCGACAACT ACTTCAATCA CGAGTTCCGG
AAAGGAGTAA ATGGTGAGCA GGAACCGTTT CATTATACCT GGGAAGACCA GATGCATTCG
GGCTTTTACT GGTGGGGAAC CATCTTCCGG AATCTGGGTG CTAAAACCGC TACTATTTCG
GGGGCGCCAA CGGCCGCATC CCTGAAGGGA GTAGACGTCT ACATCATCGT TGATCCCGAT
ACGCCAAAGG AGACGGCGAA ACCCAATTAC GTTCGCGATG CAGATATCAA CGCTATTGCC
GATTGGGTGC AGGCCGGTGG TACGCTGGTG CTGATGGCCA ACGACACGTC GAACTGCGAG
CATGTGAACT TCAACAAGCT GGCCGCTCGT TTTGGCATGC AGTTTCTGCC CAAAAACCGG
AACATGGTAC AGGGTACGCA GTGGGATCAG GGGACAATCT CGATTCCCGT CGGAGGGCAG
TCTATTTTTC CGACCACCCG GACGGTCTAC ATCAAAGAAC TGGCCCCCCT CGCTGTGAAG
GCTCCTGCCA AAGCCGCTGT GACCGACGGT GGCGACATTA TCATGGGTGT GGCTACAGTG
GGCAAGGGTA GGGTCTTTGC CGTGGGTGAT CCCTGGCTCT ACAATGAGTA TGTCGACGGT
CGTCGTATAC CTGCCAAATT TCAGAACTTC CAGGCTGCCA AAGAATTGGC TACCTGGCTG
GTGGGTGGTA AATAG
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| Protein sequence | MKFSLLGSLL LVGYATLAQP TVNKAARDTP WSQRMVATIM ANNADSIAYV REGKDARWEY
EMGVLLEAVE QVWYRTADDR YFQYIQKNMD RYVNADGDIR TYKMDDYNID FVTPGRALLL
LAQQSLPGNA KYRKAAEVLR KQLAQQPRTK EGGFWHKKRY PYQMWLDGLY MAEPFYAEYT
RLYGDEKNFD DIVNQFVWMD NHARDEKTGL LYHGWDESRE QKWANKQTGK SPNFWSRSIG
WYVMALVDAL DYVPQSHPRR GELVAILQRV MPAIVKYQDP KTGCWYQVTD RLGDKGNYIE
ASGTSMFVYA LAKGVRMGYL PASLAAPAQK GYAGILKNFI TTDAQGQIHL EKTVLVSGLG
GNPYRDGSYE YYLSEPLRQD DLKGVGPFIM ASVEMEIAAE RGIAKGKTVA VDNYFNHEFR
KGVNGEQEPF HYTWEDQMHS GFYWWGTIFR NLGAKTATIS GAPTAASLKG VDVYIIVDPD
TPKETAKPNY VRDADINAIA DWVQAGGTLV LMANDTSNCE HVNFNKLAAR FGMQFLPKNR
NMVQGTQWDQ GTISIPVGGQ SIFPTTRTVY IKELAPLAVK APAKAAVTDG GDIIMGVATV
GKGRVFAVGD PWLYNEYVDG RRIPAKFQNF QAAKELATWL VGGK
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