| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1023 |
|---|
| Symbol | |
|---|
| ID | 8724753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1240467 |
|---|
| End bp | 1242044 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003385873 |
|---|
| Protein GI | 284035943 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.271687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCATC AACTTTCCCT TACCCTATCT CCCGAACTGG CCCTGGACGA AACGACTTTC
CGGGAACAGG CCTTAGCGCA TCTTTCACTG CCCAACACGA CCGATATCGT CGTGCGTAAG
CGTCGGCAGT CGATAGATGC CCGTAACCGG CAGGTTCGGG TAAAAGTCGA TGCCGACGTT
TATGCCGGAG AAACCCCTCC CCCGCTCATT CACTACCGGA AACCCCAAAC GGATGTGAGC
CGGGCACCTC AGGCTATCGT AGTGGGGGCC GGTCCTGCCG GTCTGTTTGC AGCTCTGCGT
CTAATTGAGT TAGGTATCAA ACCCATCGTG CTGGAACGCG GCAGCGATGT GCGCGCCCGA
CGCCGTGACC TGGCGGCTAT CAACAAAGAC CATATCGTCA ATCCGGAATC AAACTATTGC
TTTGGCGAAG GGGGAGCCGG AACCTATTCG GATGGTAAAT TATACACCCG CTCCACCAAG
CGGGGCGATG TTCGGCGGAT ACTGGAAATT TTCGTAGCGC ATGGAGCTAC CGAACAGATT
CTGGTCGATG CTCATCCGCA TATTGGTACT AACAAACTTC CCAACGTTGT GACGGACCTC
CGCGAGAGTA TCCTGAAAGC AGGGGGTGAA GTTCGGTTCG ACACAAAAGT TACGGACCTG
ATTCTGGCCG GTAACGAGTT GAAGGGCGTC GTGCTGGCTA ACGGGGACTC ACTTACGGGC
ATTGGTGTCA TTCTGGCTAC GGGCCACTCC GCCCGCGACA TTTTTTATCT GCTGCACCAA
CGACATGTGC TGATCGAAGC CAAACCGTTT GCTATGGGCG TTCGTATTGA GCATCAGCAG
AGCCTGATCG ACCAGTTCCA GTACCACAGA CCAACCCGGG GTGATTATTT GCCGGCTGCG
TCGTATAGCC TGGTAGCACA AACCCGTTTC AAAGGTATTG AGCGGGGTGT TTTCTCTTTT
TGCATGTGTC CGGGCGGCTT TATCGTTCCG GCGGCCACGG CACCGGGCGA ACTGGTCGTT
AACGGCATGT CGCCGTCGCG CCGGGATTCG CAGTTTGCCA ATTCTGGGCT GGTCGTTGCC
ATTGCCGACG AAGACCTACA ACCCTATGCC GAAGAAGGGC CGCTGGCTGG TCTGGCCTTA
CAGCAGGACC TCGAACGGTG GGCATGCCGG ATGGGCGATG GCCGACAGAC AGCACCTGCC
CAGCGTATAG CTGATTTTGT GGATGGGCGC GTGTCGAACC AGCTCCTGCC TACGTCCTAC
CAGCCGGGTT TGGCTTCGGT AGATATGGGT GAGGTACTGC CCGACCATAT AGCGCAGCCG
CTGCGGCAGG GCCTGCGGGA TTTTGGCCGG AAAATGCGTG GATACATGAG TAACGATGGG
CAGGTAATTG GTGTTGAAAG CCGAACCTCT TCGCCTGTTC GTATTCCCCG TCACCGCGAA
ACCTGCGAGC ATGTTCAGGT CAGCCGCCTG TTTCCCTGCG GTGAAGGGGC CGGGTATGCC
GGGGGTATTG TCTCGGCGGC TATGGATGGA GAGCGCTGTG CCGAGGAATT AGTTAAATTG
TACAAAAAAG GGTTGTAG
|
|---|
| Protein sequence | MIHQLSLTLS PELALDETTF REQALAHLSL PNTTDIVVRK RRQSIDARNR QVRVKVDADV
YAGETPPPLI HYRKPQTDVS RAPQAIVVGA GPAGLFAALR LIELGIKPIV LERGSDVRAR
RRDLAAINKD HIVNPESNYC FGEGGAGTYS DGKLYTRSTK RGDVRRILEI FVAHGATEQI
LVDAHPHIGT NKLPNVVTDL RESILKAGGE VRFDTKVTDL ILAGNELKGV VLANGDSLTG
IGVILATGHS ARDIFYLLHQ RHVLIEAKPF AMGVRIEHQQ SLIDQFQYHR PTRGDYLPAA
SYSLVAQTRF KGIERGVFSF CMCPGGFIVP AATAPGELVV NGMSPSRRDS QFANSGLVVA
IADEDLQPYA EEGPLAGLAL QQDLERWACR MGDGRQTAPA QRIADFVDGR VSNQLLPTSY
QPGLASVDMG EVLPDHIAQP LRQGLRDFGR KMRGYMSNDG QVIGVESRTS SPVRIPRHRE
TCEHVQVSRL FPCGEGAGYA GGIVSAAMDG ERCAEELVKL YKKGL
|
|---|
| |